Emeritus Professor Roy Hall

BSc (UQ) Microbiology; PhD (James Cook University) Virology

Emeritus Professor

School of Chemistry and Molecular Biosciences

roy.hall@uq.edu.au

Molecular Biosciences Building (76), Room 553

Primary research interest

Vector-borne viruses; structure/function of viral proteins; viral vaccines and diagnostics; virus discovery

About me

I received my BSc with Hons from the Department of Microbiology at UQ in 1980. I then joined QIMR as a research associate and later enrolled as a PhD student through James Cook University of Nth Queensland, studying the antigenic structure of mosquito-borne flaviviruses and developing novel methods for their detection and diagnosis. After receiving my PhD in 1989, I spent 5 years at UWA working with Prof John Mackenzie studying the structure and function of viral proteins, and developing recombinant viral vaccines and rapid diagnostics for mosquito-borne viruses.

I joined UQ as an NHMRC Senior Research Officer in 1995 and continued to work in the area of mosquito-borne viruses. I am currently Professor of Virology at the School of Chemistry and Molecular Biosciences and founding member of the Australian Infectious Diseases Research Centre at UQ.

Research focus and collaborations

A major research interest in my lab has been the study of the structure and function of flavivirus proteins with a focus on their role in viral pathogenesis and their potential as targets for antivirals and diagnostics. These studies focus on globally important mosquito-borne pathogens, including Zika virus, West Nile virus and Chikungunya virus. These studies have recently led to the development of novel vaccine candidates, and new diagnostic assays.

Another major theme of my research is viral ecology and epidemiology. This includes isolation and genetic characterisation of new arthropod-borne viruses and assessment of their distribution and activity by serological surveys and surveillance. These studies have led to the discovery of several new mosquito-borne viruses in Australia and spawned major projects for the development of novel reagents and methodologies to enhance the accuracy and effectiveness of viral detection and disease diagnosis as well as the developement of new recombinant platforms for producing safe vaccines and diagnostics.

Collaborators

Vet School (UQ)
Qld Health
QIMR
UWA
University of Sydney
Berrimah Vet Labs (Darwin)
AAHL (Geelong)
CDC and CSU (Fort Collins, Colorado)
University of Glasgow
University of Auckland

Projects and patents

Funded projects

Chimeric insect-specific flaviviruses as new platforms for vaccines and diagnostics (NHMRC)
Strategies to prevent two viruses devaluing Australian crocodile skins (CRC for Developing Northern Australia)
What is killing the honey bees? Investigating RNA viruses in Australian bee populations (ARC Discovery)
Tiresome Ticks : investigating potential microbial pathogens in Australian ticks (ARC Linkage)
Diagnostic tests for bacterial symbionts and arboviruses (Grand Challenges Exploration Grant with SCU, UWA, QIMR and QH)
Technologies to Enhance the Discovery and Surveillance of Vector-borne Viruses (with UWA and SCU)
Effect of the THERAFLEX UV-Platelets system on the infectivity of Chikungunya and Ross River viruses (with Red Cross)
Emergence of a virulent strain of West Nile virus causing fatal equine encephalitis in South Eastern Australia (ARC Linkage - with NSW Department of Primary Industries & Hunter Valley Equine Reseacrh Centre)
Do insect-specific flavivuses regulate the transmission of mosquito-borne viral diseases in Australia? (ARC Discovery - with Qld Health)
Molecular pathogenesis of emerging West Nile viruses (NHMRC - with Alex Khromykh)
Development of the first veterinary vaccine to provide broad cross-protective immunity against multiple strategically-important Australian flaviviruses including Japanese encephalitis, Murray Valley encephalitis and West Nile virus (UQ-CIEF - with Helle Bielefeldt-0hmann at UQ Vet School)
Viral factors contributing to flavivirus-induced cell death and pathogenicity (NHMRC - with Alex Khromykh)

Consultancies and contractual research

Zoetis - licensing of reagents and research on vaccine development and assessment.
Red Cross - assessment of viral inactivation procedures for blood products.
VIDRL - PC3 viral diagnostic testing.
VecTest - development of rapid detection systems for arboviruses.

Achievements and awards

Awards

2000 - James H, Nakano Award for outstanding Scientific paper describing the initial discovery and characterisation of the West Nile outbreak in North America (Lanciotti, R.S., Roehrig, J.T., Deubel, V., Smith, J., Parker, M., Steele, K., Volpe, K.E., Crabtree, J.H., Scherret, J.H., Hall, R.A., Mackenzie, J.S., Et Al. - Science, 1999).

Featured publications

McLean, Breeanna J., Hobson-Peters, Jody, Webb, Cameron E., Watterson, Daniel, Prow, Natalie A., Nguyen, Hong Duyen, Hall-Mendelin, Sonja, Warrilow, David, Johansen, Cheryl A., Jansen, Cassie C., van den Hurk, Andrew F., Beebe, Nigel W., Schnettler, Esther, Barnard, Ross T. and Hall, Roy A. (2015) A novel insect-specific flavivirus replicates only in Aedes-derived cells and persists at high prevalence in wild Aedes vigilax populations in Sydney, Australia. Virology, 486 272-283. doi:10.1016/j.virol.2015.07.021
Goh, Lucas Y. H., Kam, Yiu-Wing, Metz, Stefan W., Hobson-Peters, Jody, Prow, Natalie A., McCarthy, Suzi, Smith, David W., Pijlman, Gorben P., Ng, Lisa F. and Hall, Roy A. (2015) A sensitive epitope-blocking ELISA for the detection of Chikungunya virus-specific antibodies in patients.. Journal of Virological Methods, 222 55-61. doi:10.1016/j.jviromet.2015.05.011
O'Brien, Caitlin A., Hobson-Peters, Jody, Yam, Alice Wei Yee, Colmant, Agathe M. G., McLean, Breeanna J., Prow, Natalie A., Watterson, Daniel, Hall-Mendelin, Sonja, Warrilow, David, Ng, Mah-Lee, Khromykh, Alexander A. and Hall, Roy A. (2015) Viral RNA intermediates as targets for detection and discovery of novel and emerging mosquito-borne viruses. PLoS Neglected Tropical Diseases, 9 3: 1-27. doi:10.1371/journal.pntd.0003629
Goh, Lucas Y. H., Hobson-Peters, Jody, Prow, Natalie A., Gardner, Joy, Bielefeldt-Ohmann, Helle, Suhrbier, Andreas and Hall, Roy A. (2015) Monoclonal antibodies specific for the capsid protein of chikungunya virus suitable for multiple applications.. Journal of General Virology, 96 3: 507-512. doi:10.1099/jgv.0.000002.

Publications

Book Chapters (11)

Journal Articles (195)

Conference Papers (34)

Book Chapters

Hall, Roy A., Hall-Mendelin, Sonja, Hobson-Peters, Jody, Prow, Natalie A. and Mackenzie, John S. (2016). Ecological and epidemiological factors influencing arbovirus diversity, evolution and spread. Arboviruses: molecular biology, evolution and control. (pp. 135-166) edited by Nikos Vasilakis and Duane J. Gubler. Poole, United Kingdom: Caister Academic Press. doi: 10.21775/9781910190210.10

Young, Paul R., Ng, Lisa F.P., Hall, Roy A., Smith, David W. and Johansen, Cheryl A. (2013). Arbovirus Infections. Manson's Tropical Diseases: Twenty-Third Edition. (pp. 129-161) edited by Jeremy Farrar. Amsterdam, The Netherlands: Elsevier. doi: 10.1016/B978-0-7020-5101-2.00015-7

Prow, Natalie A., Hall, Roy A. and Lobigs, Mario (2013). Murray Valley encephalitis virus. Neuroviral infections: RNA viruses and retroviruses. (pp. 167-192) edited by Sunit K. Singh and Daniel Růžek. Boca Raton, FL, United States: CRC Press. doi: 10.1201/b13908

Roby, Justin A., Hall, Roy A. and Khromykh, Alexander A. (2011). Nucleic acid-based infectious and pseudoinfectious flavivirus vaccines. Replicating vaccines : A new generation. (pp. 299-320) edited by Philip R. Dormitzer, Christian W. Mandl and Rino Rappuoli. Basel, Switzerland: Springer. doi: 10.1007/978-3-0346-0277-8_13

Hall, R. A., Prow, N. A. and Pyke, A. T. (2010). Ross River virus. Molecular detection of human viral pathogens. (pp. x-x) edited by Dongyou Liu. Boca Raton, FL, U.S.A.: Taylor & Francis.

Khromykh, Alexander A., Chang, David C. and Hall, Roy A. (2009). Vaccine development against West Nile Virus. West Nile Encephalitis Virus Infection: Viral Pathogenesis and the Host Immune Response. (pp. 427-451) edited by Diamond, Michael S.. New York: Springer Science + Business Media. doi: 10.1007/978-0-387-79840-0_20

Broom, A. K., Smith, D. E., Hall, R. A., Johansen, C. A. and Mackenzie, J. S. (2003). Arbovirus infections. Manson's Tropical Diseases. (pp. 725-764) edited by G. C. Cook and A. I. Zumla. Edinburgh, Scotland: Elsevier.

Scherret, J. H., Mackenzie, J. S., Hall, R. A., Deubel, V. and Gould, E. A. (2002). Phylogeny and molecular epidemiology of West Nile and Kunjin viruses. Japanese Encephalitis and West Nile Viruses. (pp. 373-390) edited by J.S. Mackenzie, A.D.T. Barrett and V. Deubel. Germany: Springer-Verlag.

Hall, R. A., Broom, A. K., Smith, D. and Mackenzie, J. S. (2002). The ecology and epidemiology of Kunjin virus. Japanese Encephalitis and West Nile Viruses. (pp. 253-269) edited by J.S. Mackenzie, A.D.T. Barrett and V. Deubel. Germany: Springer-Verlag. doi: 10.1007/978-3-642-59403-8_13

Mackenzie, J. S., Johansen, C., Ritchie, S., Van Den Hurk, A. F. and Hall, R. A. (2002). Japanese encephalitis as an emerging virus: The emergence and spread of Japanese encephalitis in Australasia. Japanese Encephalitis and West Nile Viruses. (pp. 49-73) edited by J.S. Mackenzie, A.D.T. Barrett and V. Deubel. Germany: Springer-Verlag. doi: 10.1007/978-3-642-59403-8_3

Mackenzie, J. S., Hall, R. A., Lindsay, M., Bielefeldt-Ohmann, H. and Poidinger, M. (2000). Molecular epidemiology and phylogeny of Australian arboviruses. Molecular epidemiology of infectious diseases. (pp. 297-315) edited by GL Hammer, N Nichols, C Mitchell and R. C. Andrew Thompson. London: Oxford University Press.

Journal Articles

Titball, Richard W., Bernstein, David I., Fanget, Nicolas V. J., Hall, Roy A., Longet, Stephanie, MacAry, Paul A., Rupp, Richard E., van Gils, Marit, von Messling, Veronika, Walker, David H. and Barrett, Alan D. T. (2024). Progress with COVID vaccine development and implementation. npj Vaccines, 9 (1) 69. doi: 10.1038/s41541-024-00867-3

Habarugira, Gervais, Harrison, Jessica J., Moran, Jasmin, Suen, Willy W., Colmant, Agathe M. G., Hobson-Peters, Jody, Isberg, Sally R., Bielefeldt-Ohmann, Helle and Hall, Roy A. (2023). A chimeric vaccine protects farmed saltwater crocodiles from West Nile virus-induced skin lesions. npj Vaccines, 8 (1) 93, 1-9. doi: 10.1038/s41541-023-00688-w

Colmant, Agathe M. G., Warrilow, David, Hall-Mendelin, Sonja, Onn, Michael, Hobson-Peters, Jody, Huang, Bixing, Kurucz, Nina, Warchot, Allan, Primmer, Bridgette R., Isberg, Sally, Bielefeldt-Ohmann, Helle and Hall, Roy A. (2022). Arthropod-borne virus surveillance as a tool to study the Australian mosquito virome. Viruses, 14 (9) 1882, 1-7. doi: 10.3390/v14091882

Tabata, Koshiro, Itakura, Yukari, Toba, Shinsuke, Uemura, Kentaro, Kishimoto, Mai, Sasaki, Michihito, Harrison, Jessica J., Sato, Akihiko, Hall, William W., Hall, Roy A., Sawa, Hirofumi and Orba, Yasuko (2022). Serological characterization of lineage II insect-specific flaviviruses compared with pathogenic mosquito-borne flaviviruses. Biochemical and Biophysical Research Communications, 616, 115-121. doi: 10.1016/j.bbrc.2022.05.080

Torres, Francisco J., Parry, Rhys, Hugo, Leon E. , Slonchak, Andrii , Newton, Natalee D. , Vet, Laura J. , Modhiran, Naphak, Pullinger, Brody , Wang, Xiaohui , Potter, James , Winterford, Clay , Hobson-Peters, Jody , Hall, Roy A. and Khromykh, Alexander A. (2022). Reporter flaviviruses as tools to demonstrate homologous and heterologous superinfection exclusion. Viruses, 14 (7) 1501, 1501. doi: 10.3390/v14071501

Kurucz, Nina, McMahon, Jamie Lee, Warchot, Allan, Hewitson, Glen, Barcelon, Jean, Moore, Frederick, Moran, Jasmin, Harrison, Jessica J., Colmant, Agathe M. G., Staunton, Kyran M., Ritchie, Scott A., Townsend, Michael, Steiger, Dagmar Meyer, Hall, Roy A., Isberg, Sally R. and Hall-Mendelin, Sonja (2022). Nucleic acid preservation card surveillance is effective for monitoring arbovirus transmission on crocodile farms and provides a one health benefit to northern Australia. Viruses, 14 (6) 1342, 1-14. doi: 10.3390/v14061342

Habarugira, Gervais, Moran, Jasmin, Harrison, Jessica J., Isberg, Sally R., Hobson-Peters, Jody, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2022). Evidence of Infection with Zoonotic Mosquito-Borne Flaviviruses in Saltwater Crocodiles (Crocodylus porosus) in Northern Australia. Viruses, 14 (5) 1106. doi: 10.3390/v14051106

Slonchak, Andrii, Parry, Rhys, Pullinger, Brody, Sng, Julian D. J., Wang, Xiaohui, Buck, Teresa F., Torres, Francisco J., Harrison, Jessica J., Colmant, Agathe M. G., Hobson-Peters, Jody, Hall, Roy A., Tuplin, Andrew and Khromykh, Alexander A. (2022). Structural analysis of 3’UTRs in insect flaviviruses reveals novel determinants of sfRNA biogenesis and provides new insights into flavivirus evolution. Nature Communications, 13 (1) 1279, 1-16. doi: 10.1038/s41467-022-28977-3

O’Brien, Caitlin A., Huang, Bixing, Warrilow, David, Hazlewood, Jessamine E., Bielefeldt-Ohmann, Helle, Hall-Mendelin, Sonja, Pegg, Cassandra L., Harrison, Jessica J., Paramitha, Devina, Newton, Natalee D., Schulz, Benjamin L., Suhrbier, Andreas, Hobson-Peters, Jody and Hall, Roy A. (2022). Extended characterisation of five archival tick-borne viruses provides insights for virus discovery in Australian ticks. Parasites and Vectors, 15 (1) 59, 59. doi: 10.1186/s13071-022-05176-z

Hazlewood, Jessamine E., Tang, Bing, Yan, Kexin, Rawle, Daniel J., Harrison, Jessica J., Hall, Roy A., Hobson-Peters, Jody and Suhrbier, Andreas (2022). The chimeric Binjari-Zika vaccine provides long-term protection against ZIKA virus challenge. Vaccines, 10 (1) 85. doi: 10.3390/vaccines10010085

Choo, Jovin J. Y., McMillan, Christopher L. D., Fernando, Germain J. P., Hall, Roy A., Young, Paul R., Hobson-Peters, Jody and Muller, David A. (2021). Developing a stabilizing formulation of a live chimeric dengue virus vaccine dry coated on a high-density microarray patch. Vaccines, 9 (11) 1301. doi: 10.3390/vaccines9111301

Harrison, Jessica J., Hobson-Peters, Jody, Bielefeldt-Ohmann, Helle and Hall, Roy A. (2021). Chimeric vaccines based on novel insect-specific flaviviruses. Vaccines, 9 (11) 1230, 1230. doi: 10.3390/vaccines9111230

Scott, Connor A. P., Amarilla, Alberto A., Bibby, Summa, Newton, Natalee D., Hall, Roy A., Hobson-Peters, Jody, Muller, David A., Chappell, Keith J., Young, Paul R., Modhiran, Naphak and Watterson, Daniel (2021). Implications of dengue virus maturation on vaccine induced humoral immunity in mice. Viruses, 13 (9) 1843, 1843. doi: 10.3390/v13091843

O'Brien, Caitlin A., Harrison, Jessica J., Colmant, Agathe M. G., Traves, Renee J., Paramitha, Devina, Hall-Mendelin, Sonja, Bielefeldt-Ohmann, Helle, Vet, Laura J., Piyasena, Thisun B. H., Newton, Natalee D., Yam, Alice W., Hobson-Peters, Jody and Hall, Roy A. (2021). Improved detection of flaviviruses in Australian mosquito populations via replicative intermediates. Journal of General Virology, 102 (7) 001617. doi: 10.1099/jgv.0.001617

Hardy, Joshua M., Newton, Natalee D., Modhiran, Naphak, Scott, Connor A. P., Venugopal, Hariprasad, Vet, Laura J., Young, Paul R., Hall, Roy A., Hobson-Peters, Jody, Coulibaly, Fasséli and Watterson, Daniel (2021). A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses. Nature Communications, 12 (1) 3266, 3266. doi: 10.1038/s41467-021-22773-1

Choo, Jovin J. Y., Vet, Laura J., McMillan, Christopher L. D., Harrison, Jessica J., Scott, Connor A. P., Depelsenaire, Alexandra C. I., Fernando, Germain J. P., Watterson, Daniel, Hall, Roy A., Young, Paul R., Hobson-Peters, Jody and Muller, David A. (2021). A chimeric dengue virus vaccine candidate delivered by high density microarray patches protects against infection in mice. npj Vaccines, 6 (1) 66, 66. doi: 10.1038/s41541-021-00328-1

Newton, Natalee D., Hardy, Joshua M., Modhiran, Naphak, Hugo, Leon E., Amarilla, Alberto A., Bibby, Summa, Venugopal, Hariprasad, Harrison, Jessica J., Traves, Renee J., Hall, Roy A., Hobson-Peters, Jody, Coulibaly, Fasséli and Watterson, Daniel (2021). The structure of an infectious immature flavivirus redefines viral architecture and maturation. Science Advances, 7 (20) eabe4507, 1-12. doi: 10.1126/sciadv.abe4507

Colmant, Agathe M. G., Hobson-Peters, Jody, Slijkerman, Teun A. P., Harrison, Jessica J., Pijlman, Gorben P., van Oers, Monique M., Simmonds, Peter, Hall, Roy A. and Fros, Jelke J. (2021). Insect-specific flavivirus replication in mammalian cells is inhibited by physiological temperature and the zinc-finger antiviral protein. Viruses, 13 (4) 573, 1-16. doi: 10.3390/v13040573

McLean, Breeanna J., Hall-Mendelin, Sonja, Webb, Cameron E., Bielefeldt-Ohmann, Helle, Ritchie, Scott A., Hobson-Peters, Jody, Hall, Roy A. and Van Den Hurk, Andrew F. (2021). The Insect-Specific Parramatta River Virus Is Vertically Transmitted by Aedes vigilax Mosquitoes and Suppresses Replication of Pathogenic Flaviviruses in Vitro. Vector-Borne and Zoonotic Diseases, 21 (3), 208-215. doi: 10.1089/vbz.2020.2692

Westlake, Daniel, Bielefeldt-Ohmann, Helle, Prow, Natalie A. and Hall, Roy A. (2021). Novel flavivirus attenuation markers identified in the envelope protein of alfuy virus. Viruses, 13 (2) 147. doi: 10.3390/v13020147

Orba, Yasuko, Matsuno, Keita, Nakao, Ryo, Kryukov, Kirill, Saito, Yumi, Kawamori, Fumihiko, Vega, Ariel Loza, Watanabe, Tokiko, Maemura, Tadashi, Sasaki, Michihito, Hall, William W., Hall, Roy A., Pereira, Juan Antonio, Nakagawa, So and Sawa, Hirofumi (2021). Diverse mosquito-specific flaviviruses in the Bolivian Amazon basin. Journal of General Virology, 102 (3) 001518. doi: 10.1099/JGV.0.001518

Rustanti, Lina, Hobson-Peters, Jody, Colmant, Agathe M. G., Hall, Roy A., Young, Paul R., Reichenberg, Stefan, Tolksdorf, Frank, Sumian, Chryslain, Gravemann, Ute, Seltsam, Axel, Marks, Denese C. and Faddy, Helen Z. M. (2020). Inactivation of Japanese encephalitis virus in plasma by methylene blue combined with visible light and in platelet concentrates by ultraviolet C light. Transfusion, 60 (11), 2655-2660. doi: 10.1111/trf.16021

O’Brien, Caitlin A., Pegg, Cassandra L., Nouwens, Amanda S., Bielefeldt-Ohmann, Helle, Huang, Bixing, Warrilow, David, Harrison, Jessica J., Haniotis, John, Schulz, Benjamin L., Paramitha, Devina, Colmant, Agathe M. G., Newton, Natalee D., Doggett, Stephen L., Watterson, Daniel, Hobson-Peters, Jody and Hall, Roy A. (2020). A unique relative of Rotifer birnavirus Isolated from Australian mosquitoes. Viruses, 12 (9) 1056, 1056. doi: 10.3390/v12091056

Hazlewood, Jessamine E., Rawle, Daniel J., Tang, Bing, Yan, Kexin, Vet, Laura J., Nakayama, Eri, Hobson-Peters, Jody, Hall, Roy A. and Suhrbier, Andreas (2020). A Zika vaccine generated using the chimeric insect-specific binjari virus platform protects against fetal brain infection in pregnant mice. Vaccines, 8 (3) 496, 496-12. doi: 10.3390/vaccines8030496

Habarugira, Gervais, Suen, Willy W., Hobson-Peters, Jody, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2020). West Nile Virus: an update on pathobiology, epidemiology, diagnostics, control and “One Health” implications. Pathogens, 9 (7) 589, 589-51. doi: 10.3390/pathogens9070589

Yan, Kexin, Vet, Laura J., Tang, Bing, Hobson-Peters, Jody, Rawle, Daniel J., Le, Thuy T., Larcher, Thibaut, Hall, Roy A. and Suhrbier, Andreas (2020). A yellow fever virus 17D infection and disease mouse model used to evaluate a chimeric Binjari-yellow fever virus vaccine. Vaccines, 8 (3) 368, 368-14. doi: 10.3390/vaccines8030368

Harrison, Jessica J., Hobson-Peters, Jody, Colmant, Agathe M. G., Koh, Joanna, Newton, Natalee D., Warrilow, David, Bielefeldt-Ohmann, Helle, Piyasena, Thisun B. H., O’Brien, Caitlin A., Vet, Laura J., Paramitha, Devina, Potter, James R., Davis, Steven S., Johansen, Cheryl A., Setoh, Yin Xiang, Khromykh, Alexander A. and Hall, Roy A. (2020). Antigenic characterization of new lineage II insect-specific flaviviruses in Australian mosquitoes and identification of host restriction factors. mSphere, 5 (3) e00095, 1-19. doi: 10.1128/msphere.00095-20

Torii, Shiho, Orba, Yasuko, Sasaki, Michihito, Tabata, Koshiro, Wada, Yuji, Carr, Michael, Hobson-Peters, Jody, Hall, Roy A., Takada, Ayato, Fukuhara, Takasuke, Matsuura, Yoshiharu, Hall, William W and Sawa, Hirofumi (2020). Host ESCRT factors are recruited during Chikungunya virus infection and are required during the intracellular viral replication cycle. Journal of Biological Chemistry, 295 (23), jbc.RA119.012303-7957. doi: 10.1074/jbc.ra119.012303

Vet, Laura J., Setoh, Yin Xiang, Amarilla, Alberto A., Habarugira, Gervais, Suen, Willy W., Newton, Natalee D., Harrison, Jessica J., Hobson-Peters, Jody, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2020). Protective efficacy of a chimeric insect-specific flavivirus vaccine against West Nile virus. Vaccines, 8 (2) 258, 258. doi: 10.3390/vaccines8020258

Slonchak, Andrii, Hugo, Leon E., Freney, Morgan E., Hall-Mendelin, Sonja, Amarilla, Alberto A., Torres, Francisco J., Setoh, Yin Xiang, Peng, Nias Y. G., Sng, Julian D. J., Hall, Roy A., van den Hurk, Andrew F., Devine, Gregor J. and Khromykh, Alexander A. (2020). Zika virus noncoding RNA suppresses apoptosis and is required for virus transmission by mosquitoes. Nature Communications, 11 (1) 2205, 2205. doi: 10.1038/s41467-020-16086-y

Nguyen, Wilson, Nakayama, Eri, Yan, Kexin, Tang, Bing, Le, Thuy T., Liu, Liang, Cooper, Tamara H., Hayball, John D., Faddy, Helen M., Warrilow, David, Allcock, Richard J. N., Hobson-Peters, Jody, Hall, Roy A., Rawle, Daniel J., Lutzky, Viviana P., Young, Paul, Oliveira, Nidia M., Hartel, Gunter, Howley, Paul M., Prow, Natalie A. and Suhrbier, Andreas (2020). Arthritogenic alphavirus vaccines: serogrouping versus cross-protection in mouse models. Vaccines, 8 (2) 209, 209. doi: 10.3390/vaccines8020209

Abbo, Sandra R., Visser, Tessa M., Wang, Haidong, Göertz, Giel P., Fros, Jelke J., Abma-Henkens, Marleen H C, Geertsema, Corinne, Vogels, Chantal B F, Koopmans, Marion P G, Reusken, Chantal B E M, Hall-Mendelin, Sonja, Hall, Roy A., van Oers, Monique M., Koenraadt, Constantianus J M and Pijlman, Gorben P. (2020). The invasive Asian bush mosquito Aedes japonicus found in the Netherlands can experimentally transmit Zika virus and Usutu virus. PLoS Neglected Tropical Diseases, 14 (4) e0008217, 1-22. doi: 10.1371/journal.pntd.0008217

Colmant, Agathe M. G., Bielefeldt-Ohmann, Helle, Vet, Laura J., O’Brien, Caitlin A., Bowen, Richard A., Hartwig, Airn E., Davis, Steven, Piyasena, Thisun B. H., Habarugira, Gervais, Harrison, Jessica J., Hobson-Peters, Jody and Hall, Roy A. (2020). NS4/5 mutations enhance flavivirus Bamaga virus infectivity and pathogenicity in vitro and in vivo. PLoS Neglected Tropical Diseases , 14 (3) e0008166, 1-28. doi: 10.1371/journal.pntd.0008166

Habarugira, Gervais, Moran, Jasmin, Colmant, Agathe M G, Davis, Steven S., O'Brien, Caitlin A., Hall-Mendelin, Sonja, McMahon, Jamie, Hewitson, Glen, Nair, Neelima, Barcelon, Jean, Suen, Willy W., Melville, Lorna, Hobson-Peters, Jody, Hall, Roy A., Isberg, Sally R. and Bielefeldt-Ohmann, Helle (2020). Mosquito-independent transmission of West Nile virus in farmed saltwater crocodiles (Crocodylus porosus). Viruses, 12 (2) 198, 198. doi: 10.3390/v12020198

Colmant, Agathe M. G., O'Brien, Caitlin A., Newton, Natalee D., Watterson, Daniel, Hardy, Joshua, Coulibaly, Fasséli, Bielefeldt-Ohmann, Helle, Warrilow, David, Huang, Bixing, Paramitha, Devina, Harrison, Jessica J., Hall, Roy A. and Hobson-Peters, Jody (2020). Novel monoclonal antibodies against Australian strains of negeviruses and insights into virus structure, replication and host -restriction. Journal of General Virology, 101 (4), 440-452. doi: 10.1099/jgv.0.001388

Hobson-Peters, Jody, Harrison, Jessica J., Watterson, Daniel, Hazlewood, Jessamine E., Vet, Laura J., Newton, Natalee D., Warrilow, David, Colmant, Agathe M. G., Taylor, Carmel, Huang, Bixing, Piyasena, Thisun B. H., Chow, Weng Kong, Setoh, Yin Xiang, Tang, Bing, Nakayama, Eri, Yan, Kexin, Amarilla, Alberto A., Wheatley, Sarah, Moore, Peter R., Finger, Mitchell, Kurucz, Nina, Modhiran, Naphak, Young, Paul R., Khromykh, Alexander A., Bielefeldt-Ohmann, Helle, Suhrbier, Andreas and Hall, Roy A. (2019). A recombinant platform for flavivirus vaccines and diagnostics using chimeras of a new insect-specific virus. Science Translational Medicine, 11 (522) eaax7888, 1-15. doi: 10.1126/scitranslmed.aax7888

Piyasena, Thisun B H, Newton, Natalee D, Hobson-Peters, Jody, Vet, Laura J, Setoh, Yin X, Bielefeldt-Ohmann, Helle, Khromykh, Alexander A and Hall, Roy A (2019). Chimeric viruses of the insect-specific flavivirus Palm Creek with structural proteins of vertebrate-infecting flaviviruses identify barriers to replication of insect-specific flaviviruses in vertebrate cells. The Journal of general virology, 100 (11), 1580-1586. doi: 10.1099/jgv.0.001326

Abudurexiti, Abulikemu, Adkins, Scott, Alioto, Daniela, Alkhovsky, Sergey V., Avšič-Županc, Tatjana, Ballinger, Matthew J., Bente, Dennis A., Beer, Martin, Bergeron, Éric, Blair, Carol D., Briese, Thomas, Buchmeier, Michael J., Burt, Felicity J., Calisher, Charles H., Cháng, Chénchén, Charrel, Rémi N., Choi, Il Ryong, Clegg, J. Christopher S., de la Torre, Juan Carlos, de Lamballerie, Xavier, Dèng, Fēi, Di Serio, Francesco, Digiaro, Michele, Drebot, Michael A., Duàn, Xiǎoméi, Ebihara, Hideki, Elbeaino, Toufic, Ergünay, Koray, Fulhorst, Charles F. ... Kuhn, Jens H. (2019). Taxonomy of the order Bunyavirales: update 2019. Archives of Virology, 164 (7), 1949-1965. doi: 10.1007/s00705-019-04253-6

Piyasena, Thisun B. H., Setoh, Yin X., Hobson-Peters, Jody, Newton, Natalee D., Bielefeldt-Ohmann, Helle, McLean, Breeanna J., Vet, Laura J., Khromykh, Alexander A. and Hall, Roy A. (2019). Author Correction: Infectious DNAs derived from insect-specific flavivirus genomes enable identification of pre- and post-entry host restrictions in vertebrate cells. Scientific Reports, 9 (1) 8431, 8431. doi: 10.1038/s41598-019-44657-7

Setoh, Yin Xiang, Amarilla, Alberto A., Peng, Nias Y. G., Griffiths, Rebecca E., Carrera, Julio, Freney, Morgan E., Nakayama, Eri, Ogawa, Shinya, Watterson, Daniel, Modhiran, Naphak, Nanyonga, Faith Elizabeth, Torres, Francisco J., Slonchak, Andrii, Periasamy, Parthiban, Prow, Natalie A., Tang, Bing, Harrison, Jessica, Hobson-Peters, Jody, Cuddihy, Thom, Cooper-White, Justin, Hall, Roy A., Young, Paul R., Mackenzie, Jason M., Wolvetang, Ernst, Bloom, Jesse D., Suhrbier, Andreas and Khromykh, Alexander A. (2019). Determinants of Zika virus host tropism uncovered by deep mutational scanning. Nature Microbiology, 4 (5), 876-887. doi: 10.1038/s41564-019-0399-4

Maes, Piet, Adkins, Scott, Alkhovsky, Sergey V., Avsic-Zupanc, Tatjana, Ballinger, Matthew J., Bente, Dennis A., Beer, Martin, Bergeron, Eric, Blair, Carol D., Briese, Thomas, Buchmeier, Michael J., Burt, Felicity J., Calisher, Charles H., Charrel, Remi N., Choi, Il Ryong, Clegg, J. Christopher S., de la Torre, Juan Carlos, de Lamballerie, Xavier, DeRisi, Joseph L., Digiaro, Michele, Drebot, Mike, Ebihara, Hideki, Elbeaino, Toufic, Ergunay, Koray, Fulhorst, Charles F., Garrison, Aura R., Gao, George Fu, Gonzalez, Jean-Paul J., Groschup, Martin H. ... Kuhn, Jens H. (2019). Taxonomy of the order Bunyavirales: second update 2018. Archives of Virology, 164 (3), 927-941. doi: 10.1007/s00705-018-04127-3

Faddy, Helen M., Fryk, Jesse J., Hall, Roy A., Young, Paul R., Reichenberg, Stefan, Tolksdorf, Frank, Sumian, Chryslain, Gravemann, Ute, Seltsam, Axel and Marks, Denese C. (2019). Inactivation of yellow fever virus in plasma after treatment with methylene blue and visible light and in platelet concentrates following treatment with ultraviolet C light. Transfusion, 59 (7) trf.15332, 2223-2227. doi: 10.1111/trf.15332

Warrilow, David, Huang, Bixing, Newton, Natalee D., Harrison, Jessica J., Johnson, Karyn N., Chow, Weng Kong, Hall, Roy A. and Hobson-Peters, Jody (2018). The taxonomy of an Australian nodavirus isolated from mosquitoes. PLoS One, 13 (12) e0210029, 1-9. doi: 10.1371/journal.pone.0210029

O'Brien, Caitlin A., Hall, Roy A. and Lew-Tabor, Ala (2018). Could Australian ticks harbour emerging viral pathogens?. Microbiology Australia, 39 (4), 185-190. doi: 10.1071/MA18060

Colmant, Agathe M. G., Hall-Mendelin, Sonja, Ritchie, Scott A., Bielefeldt-Ohmann, Helle, Harrison, Jessica J., Newton, Natalee D., O’Brien, Caitlin A., Cazier, Chris, Johansen, Cheryl A., Hobson-Peters, Jody, Hall, Roy A. and van den Hurk, Andrew F. (2018). The recently identified flavivirus Bamaga virus is transmitted horizontally by Culex mosquitoes and interferes with West Nile virus replication in vitro and transmission in vivo. PLoS Neglected Tropical Diseases, 12 (10) e0006886, e0006886. doi: 10.1371/journal.pntd.0006886

O'Brien, Caitlin A., Hall-Mendelin, Sonja, Hobson-Peters, Jody, Deliyannis, Georgia, Allen, Andy, Lew-Tabor, Ala, Rodriguez-Valle, Manuel, Barker, Dayana, Barker, Stephen C. and Hall, Roy A. (2018). Discovery of a novel iflavirus sequence in the eastern paralysis tick Ixodes holocyclus. Archives of Virology, 163 (9), 1-7. doi: 10.1007/s00705-018-3868-9

Hall, Roy A. and Hobson-Peters, Jody (2018). Newly discovered mosquito viruses help control vector-borne viral diseases. Microbiology Australia, 39 (2), 72-75. doi: 10.1071/MA18020

Prow, Natalie A., Mah, Marcus G., Deerain, Joshua M., Warrilow, David, Colmant, Agathe M. G., O'Brien, Caitlin A., Harrison, Jessica J., McLean, Breeanna J., Hewlett, Elise K., Piyasena, Thisun B. H., Hall-Mendelin, Sonja, van den Hurk, Andrew F., Watterson, Daniel, Huang, Bixing, Schulz, Benjamin L., Webb, Cameron E., Johansen, Cheryl A., Chow, Weng K., Hobson-Peters, Jody, Cazier, Chris, Coffey, Lark L., Faddy, Helen M., Suhrbier, Andreas, Bielefeldt-Ohmann, Helle and Hall, Roy A. (2018). New genotypes of Liao ning virus (LNV) in Australia exhibit an insect-specific phenotype. The Journal of General Virology, 99 (4), 596-609. doi: 10.1099/jgv.0.001038

Faddy, Helen M., Tran, Thu V., Hoad, Veronica C., Seed, Clive R., Viennet, Elvina, Chan, Hiu-Tat, Harley, Robert, Hewlett, Elise, Hall, Roy A., Bielefeldt-Ohmann, Helle, Flower, Robert L. P. and Prow, Natalie A. (2018). Ross River virus in Australian blood donors: possible implications for blood transfusion safety. Transfusion, 58 (2), 485-492. doi: 10.1111/trf.14472

Fryk, Jesse J., Marks, Denese C., Hobson-Peters, Jody, Watterson, Daniel, Hall, Roy A., Young, Paul R., Reichenberg, Stefan, Tolksdorf, Frank, Sumian, Chryslain, Gravemann, Ute, Seltsam, Axel and Faddy, Helen M. (2017). Reduction of Zika virus infectivity in platelet concentrates after treatment with ultraviolet C light and in plasma after treatment with methylene blue and visible light. Transfusion, 57 (11), 2677-2682. doi: 10.1111/trf.14256

Piyasena, Thisun B. H., Setoh, Yin X., Hobson-Peters, Jody, Prow, Natalie A., Bielefeldt-Ohmann, Helle, Khromykh, Alexander A., Perera, David, Cardosa, Mary J., Kirkland, Peter D. and Hall, Roy A. (2017). Differential Diagnosis of Flavivirus Infections in Horses Using Viral Envelope Protein Domain III Antigens in Enzyme-Linked Immunosorbent Assay. Vector Borne and Zoonotic Diseases, 17 (12), 825-835. doi: 10.1089/vbz.2017.2172

Colmant, Agathe M. G. , Etebari, Kayvan, Webb, Cameron E., Ritchie, Scott A., Jansen, Cassie C. , van den Hurk, Andrew F., Bielefeldt-Ohmann, Helle, Hobson-Peters, Jody, Asgari, Sassan and Hall, Roy A. (2017). Discovery of new orbiviruses and totivirus from Anopheles mosquitoes in Eastern Australia. Archives of Virology, 162 (11), 1-6. doi: 10.1007/s00705-017-3515-x

Johansen, Cheryl A., Williams, Simon H., Melville, Lorna F., Nicholson, Jay, Hall, Roy A., Bielefeldt-Ohmann, Helle, Prow, Natalie A., Chidlow, Glenys R., Wong, Shani, Sinha, Rohini, Williams, David T., Lipkin, W. Ian and Smith, David W. (2017). Characterization of Fitzroy River Virus and serologic evidence of human and animal infection. Emerging Infectious Diseases, 23 (8), 1289-1299. doi: 10.3201/eid2308.161440

Lee, Morris, Etebari, Kayvan, Hall-Mendelin, Sonja, van den Hurk, Andrew F., Hobson-Peters, Jody, Vatipally, Sreenu, Schnettler, Esther, Hall, Roy and Asgari, Sassan (2017). Understanding the role of microRNAs in the interaction of Aedes aegypti mosquitoes with an insect-specific flavivirus. Journal of General Virology, 98 (7) 000832, 1892-1903. doi: 10.1099/jgv.0.000832

Piyasena, Thisun B. H. , Setoh, Yin X., Hobson-Peters, Jody, Newton, Natalee D. , Bielefeldt-Ohmann, Helle, McLean, Breeanna J. , Vet, Laura J. , Khromykh, Alexander A. and Hall, Roy A. (2017). Infectious DNAs derived from insect-specific flavivirus genomes enable identification of pre- and post-entry host restrictions in vertebrate cells. Scientific Reports, 7 (1) 2940, 2940.1-2940.11. doi: 10.1038/s41598-017-03120-1

O'Brien, Caitlin A., McLean, Breeanna J., Colmant, Agathe M. G., Harrison, Jessica J., Hall-Mendelin, Sonja, van den Hurk, Andrew F., Johansen, Cheryl A., Watterson, Daniel, Bielefeldt-Ohmann, Helle, Newton, Natalee D., Schulz, Benjamin L., Hall, Roy A. and Hobson-Peters, Jody (2017). Discovery and characterisation of castlerea virus, a new species of Negevirus isolated in Australia. Evolutionary Bioinformatics, 13, 1176934317691269. doi: 10.1177/1176934317691269

Taylor, Adam, Liu, Xiang, Zaid, Ali, Goh, Lucas Y. H., Hobson-Peters, Jody, Hall, Roy A., Merits, Andres and Mahalingam, Suresh (2017). Mutation of the N-Terminal region of Chikungunya Virus Capsid Protein: implications for vaccine design. mBio, 8 (1) e01970-16, e01970-16.1-e01970-16.14. doi: 10.1128/mBio.01970-16

Bielefeldt-Ohmann, Helle, Bosco-Lauth, Angela, Hartwig, Airn-Elizabeth, Uddin, M. Jasim, Barcelon, Jean, Suen, Willy W., Wang, Wenqi, Hall, Roy A. and Bowen, Richard A. (2017). Characterization of non-lethal West Nile Virus (WNV) infection in horses: subclinical pathology and innate immune response. Microbial Pathogenesis, 103, 71-79. doi: 10.1016/j.micpath.2016.12.018

Hall, Roy A., Bielefeldt-Ohmann, Helle, McLean, Breeanna J., O'Brien, Caitlin A., Colmant, Agathe M.G., Piyasena, Thisun B.H., Harrison, Jessica J., Newton, Natalee D., Barnard, Ross T., Prow, Natalie A., Deerain, Joshua M., Mah, Marcus G.K.Y. and Hobson-Peters, Jody (2017). Commensal viruses of mosquitoes: Host restriction, transmission, and interaction with arboviral pathogens. Evolutionary Bioinformatics, 12 (Suppl 2), 35-44. doi: 10.4137/EBO.S40740

Fryk, Jesse J., Marks, Denese C., Hobson-Peters, Jody, Prow, Natalie A., Watterson, Daniel, Hall, Roy A., Young, Paul R., Reichenberg, Stefan, Sumian, Chryslain and Faddy, Helen M. (2016). Dengue and chikungunya viruses in plasma are effectively inactivated after treatment with methylene blue and visible light. Transfusion, 56 (9), 2278-2285. doi: 10.1111/trf.13729

Prow, Natalie A., Edmonds, Judith H., Williams, David T., Setoh, Yin X., Bielefeldt-Ohmann, Helle, Suen, Willy W., Hobson-Peters, Jody, van den Hurk, Andrew F., Pyke, Alyssa T., Hall-Mendelin, Sonja, Northill, Judith A., Johansen, Cheryl A., Warrilow, David, Wang, Jianning, Kirkland, Peter D., Doggett, Stephen, Andrade, Christy C., Brault, Aaron C., Khromykh, Alexander A. and Hall, Roy A. (2016). Virulence and evolution of West Nile Virus, Australia, 1960-2012. Emerging Infectious Diseases, 22 (8), 1353-1362. doi: 10.3201/eid2208.151719

Hall-Mendelin, Sonja, McLean, Breeanna J., Bielefeldt-Ohmann, Helle, Hobson-Peters, Jody, Hall, Roy A. and van den Hurk, Andrew F. (2016). The insect-specific Palm Creek virus modulates West Nile virus infection in and transmission by Australian mosquitoes. Parasites and vectors, 9 (1) 414, 414. doi: 10.1186/s13071-016-1683-2

Suen, Willy W., Uddin, Muhammad Jasim, Prow, Natalie A., Bowen, Richard A., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2016). Tissue-specific transcription profile of cytokine and chemokine genes associated with flavivirus control and non-lethal neuropathogenesis in rabbits. Virology, 494, 1-14. doi: 10.1016/j.virol.2016.03.026

Hall, Roy A. and Macdonald, Joanne (2016). Synthetic biology provides a toehold in the fight against Zika. Cell Host and Microbe, 19 (6), 752-754. doi: 10.1016/j.chom.2016.05.020.

Uddin, Muhammad Jasim , Suen, Willy W. , Bosco‑Lauth, Angela , Hartwig, Airn‑Elizabeth , Hall, Roy A. , Bowen, Richard A. and Bielefeldt‑Ohmann, Helle (2016). Kinetics of the West Nile virus induced transcripts of selected cytokines and Toll-like receptors in equine peripheral blood mononuclear cells. Veterinary Research, 47 (1) 61, 61. doi: 10.1186/s13567-016-0347-8

Faddy, Helen M., Fryk, Jesse J., Prow, Natalie A., Watterson, Daniel, Young, Paul R., Hall, Roy A., Tolksdorf, Frank, Sumian, Chryslain, Gravemann, Ute, Seltsam, Axel and Marks, Denese C. (2016). Inactivation of dengue, chikungunya, and Ross River viruses in platelet concentrates after treatment with ultraviolet C light. Transfusion, 56 (6pt2), 1548-1555. doi: 10.1111/trf.13519

Harrison, Jessica J., Warrilow, David, McLean, Breeanna J., Watterson, Daniel, O'Brien, Caitlin A., Colmant, Agathe M.G., Johansen, Cheryl A., Barnard, Ross T., Hall-Mendelin, Sonja, Davis, Steven S., Hall, Roy A. and Hobson-Peters, Jody (2016). A new Orbivirus isolated from mosquitoes in north-western Australia shows antigenic and genetic similarity to Corriparta virus but does not replicate in vertebrate cells. Viruses, 8 (5) 141, e141.1-e141.15. doi: 10.3390/v8050141

Colmant, Agathe M. G., Bielefeldt-Ohmann, Helle, Hobson-Peters, Jody, Suen, Willy W., O'Brien, Caitlin A., van den Hurk, Andrew F. and Hall, Roy A. (2016). A newly discovered flavivirus in the yellow fever virus group displays restricted replication in vertebrates. Journal of General Virology, 97 (5) 000430, 1087-1093. doi: 10.1099/jgv.0.000430

Sorenson, Alanna, Owens, Leigh, Caltabiano, Marie, Cadet-James, Yvonne, Hall, Roy, Govan, Brenda and Clancy, Paula (2016). The impact of prior flavivirus infections on the development of Type 2 diabetes among the Indigenous Australians. American Journal of Tropical Medicine And Hygiene, 95 (2), 265-268. doi: 10.4269/ajtmh.15-0727

Suen, Willy W., Prow, Natalie A., Setoh, Yin X., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2016). End-point disease investigation for virus strains of intermediate virulence as illustrated by flavivirus infections. Journal of General Virology, 97 (2), 366-377. doi: 10.1099/jgv.0.000356

Hobson-Peters, Jody, Warrilow, David, McLean, Breeanna J., Watterson, Daniel, Colmant, Agathe M.G., van den Hurk, Andrew F., Hall-Mendelin, Sonja, Hastie, Marcus L., Gorman, Jeffrey J., Harrison, Jessica J., Prow, Natalie A., Barnard, Ross T., Allcock, Richard, Johansen, Cheryl A. and Hall, Roy A. (2016). Discovery and characterisation of a new insect-specific bunyavirus from Culex mosquitoes captured in northern Australia. Virology, 489, 269-281. doi: 10.1016/j.virol.2015.11.003

Uddin, Muhammad J., Suen, Willy W., Prow, Natalie A., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2015). West Nile virus challenge alters the transcription profiles of innate immune genes in rabbit peripheral blood mononuclear cells. Frontiers in Veterinary Science, 2 (DEC) 76, 76. doi: 10.3389/fvets.2015.00076

Faddy, Helen M., Flower, Robert L.P., Seed, Clive R., Ismay, Susan, Ong, Edgar, Linnen, Jeffrey M., Cory, Robin, Holmberg, Jerry A., Hall, Roy A., Setoh, Yin X., Deerain, Joshua M. and Prow, Natalie A. (2015). Detection of emergent strains of West Nile virus with a blood screening assay. Transfusion, 56 (6), 1503-1507. doi: 10.1111/trf.13443

McLean, Breeanna J., Hobson-Peters, Jody, Webb, Cameron E., Watterson, Daniel, Prow, Natalie A., Nguyen, Hong Duyen, Hall-Mendelin, Sonja, Warrilow, David, Johansen, Cheryl A., Jansen, Cassie C., van den Hurk, Andrew F., Beebe, Nigel W., Schnettler, Esther, Barnard, Ross T. and Hall, Roy A. (2015). A novel insect-specific flavivirus replicates only in Aedes-derived cells and persists at high prevalence in wild Aedes vigilax populations in Sydney, Australia. Virology, 486, 272-283. doi: 10.1016/j.virol.2015.07.021

Suen, Willy W., Uddin, Muhammad J., Wang, Wenqi, Brown, Vienna, Adney, Danielle R., Broad, Nicole, Prow, Natalie A., Bowen, Richard A., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2015). Experimental west nile virus infection in rabbits: an alternative model for studying induction of disease and virus control. Pathogens, 4 (3), 529-558. doi: 10.3390/pathogens4030529

Wang, Jack T.H., Daly, Joshua N., Willner, Dana L., Patil, Jayee, Hall, Roy A., Schembri, Mark A., Tyson, Gene W. and Hugenholtz, Philip (2015). Do You Kiss Your Mother with That Mouth? An Authentic Large-Scale Undergraduate Research Experience in Mapping the Human Oral Microbiome. Journal of Microbiology and Biology Education, 16 (1), 50-60. doi: 10.1128/jmbe.v16i1.816

Setoh, Yin Xiang, Tan, Cindy Si En, Prow, Natalie A., Hobson-Peters, Jody, Young, Paul R., Khromykh, Alexander A. and Hall, Roy A. (2015). The I22V and L72S substitutions in West Nile virus prM protein promote enhanced prM/E heterodimerisation and nucleocapsid incorporation. Virology Journal, 12 (1) 72, 72.1-72.5. doi: 10.1186/s12985-015-0303-7

Goh, Lucas Y. H., Kam, Yiu-Wing, Metz, Stefan W., Hobson-Peters, Jody, Prow, Natalie A., McCarthy, Suzi, Smith, David W., Pijlman, Gorben P., Ng, Lisa F. and Hall, Roy A. (2015). A sensitive epitope-blocking ELISA for the detection of Chikungunya virus-specific antibodies in patients.. Journal of Virological Methods, 222, 55-61. doi: 10.1016/j.jviromet.2015.05.011

O'Brien, Caitlin A., Hobson-Peters, Jody, Yam, Alice Wei Yee, Colmant, Agathe M. G., McLean, Breeanna J., Prow, Natalie A., Watterson, Daniel, Hall-Mendelin, Sonja, Warrilow, David, Ng, Mah-Lee, Khromykh, Alexander A. and Hall, Roy A. (2015). Viral RNA intermediates as targets for detection and discovery of novel and emerging mosquito-borne viruses. PLoS Neglected Tropical Diseases, 9 (3) e0003629, 1-27. doi: 10.1371/journal.pntd.0003629

Goh, Lucas Y. H., Hobson-Peters, Jody, Prow, Natalie A., Gardner, Joy, Bielefeldt-Ohmann, Helle, Suhrbier, Andreas and Hall, Roy A. (2015). Monoclonal antibodies specific for the capsid protein of chikungunya virus suitable for multiple applications.. Journal of General Virology, 96 (3), 507-512. doi: 10.1099/jgv.0.000002.

Barton, A. J., Prow, N. A., Hall, R. A., Kidd, L. and Bielefeldt-Ohmann, H. (2015). A case of Murray Valley encephalitis in a 2-year-old Australian Stock Horse in south-east Queensland. Australian Veterinary Journal, 93 (3), 53-57. doi: 10.1111/avj.12294

Setoh, Yin Xiang, Prow, Natalie A., Rawle, Daniel J., Tan, Cindy Si En, Edmonds, Judith H., Hall, Roy A. and Khromykh, Alexander A. (2015). Systematic analysis of viral genes responsible for differential virulence between American and Australian West Nile virus strains. Journal of General Virology, 96 (Pt 6), 1297-1308. doi: 10.1099/vir.0.000069

Roby, Justin A., Setoh, Yin Xiang, Hall, Roy A. and Khromykh, Alexander A. (2015). Post-translational regulation and modifications of flavivirus structural proteins. Journal of General Virology, 96 (7), 1551-1569. doi: 10.1099/vir.0.000097

Goh, Lucas Y. H., Hobson-Peters, Jody, Prow, Natalie A., Baker, Kelly, Piyasena, Thisun B. H., Taylor, Carmel T., Rana, Ashok, Hastie, Marcus L., Gorman, Jeff J. and Hall, Roy A. (2015). The Chikungunya Virus Capsid Protein Contains Linear B Cell Epitopes in the N- and C-Terminal Regions that are Dependent on an Intact C-Terminus for Antibody Recognition. Viruses, 7 (6), 2943-2964. doi: 10.3390/v7062754

Bielefeldt-Ohmann, Helle, Prow, Natalie A., Wang, Wenqi, Tan, Cindy S. E., Coyle, Mitchell, Douma, Alysha, Hobson-Peters, Jody, Kidd, Lisa, Hall, Roy A. and Petrovsky, Nikolai (2014). Safety and immunogenicity of a delta inulin-adjuvanted inactivated Japanese encephalitis virus vaccine in pregnant mares and foals. Veterinary Research, 45 (1) 130, 130.1-130.9. doi: 10.1186/s13567-014-0130-7

van den Hurk, Andrew F., Hall-Mendelin, Sonja, Webb, Cameron E., Tan, Cindy S. E., Frentiu, Francesca D., Prow, Natalie A, and Hall, Roy A. (2014). Role of enhanced vector transmission of a new West Nile virus strain in an outbreak of equine disease in Australia in 2011. Parasites and Vectors, 7 (Art No.: 586) 586, 586. doi: 10.1186/s13071-014-0586-3

Melian, Ezequiel Balmori, Hall-Mendelin, Sonja, Du, Fangyao, Owens, Nick, Bosco-Lauth, Angela M., Nagasaki, Tomoko, Rudd, Stephen, Brault, Aaron C., Bowen, Richard A., Hall, Roy A., van den Hurk, Andrew F. and Khromykh, Alexander A. (2014). Programmed ribosomal frameshift alters expression of West Nile virus genes and facilitates virus replication in birds and mosquitoes. PLoS Pathogens, 10 (11), e1004447.1-e1004447.18. doi: 10.1371/journal.ppat.1004447

Faddy, Helen M., Prow, Natalie A., Fryk, Jesse J., Hall, Roy A., Keil, Shawn D., Goodrich, Raymond P. and Marks, Denese C. (2014). The effect of riboflavin and ultraviolet light on the infectivity of arboviruses. Transfusion, 55 (4), 824-831. doi: 10.1111/trf.12899

Roby, Justin A., Bielefeldt-Ohmann, Helle, Prow, Natalie A., Chang, David C., Hall, Roy A. and Khromykh, Alexander A. (2014). The increased expression of capsid protein in trans enhances production of single-round infectious particles by West Nile virus DNA vaccine candidate. Journal of General Virology, 95 (10), 2176-2191. doi: 10.1099/vir.0.064121-0

Prow, Natalie A., Hewlett, Elise K., Faddy, Helen M., Coiacetto, Flaminia, Wang, Wenqi, Cox, Tarnya, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2014). The Australian public is still vulnerable to emerging virulent strains of West Nile virus. Frontiers in Public Health, 2 (146) 146, 1-8. doi: 10.3389/fpubh.2014.00146

Prow, Natalie A., Setoh, Yin X., Biron, Rebecca M., Sester, David P., Kim, Kwang Sik, Hobson-Peters, Jody, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2014). The West Nile-like flavivirus Koutango is highly virulent in mice due to delayed viral clearance and the induction of a poor neutralizing antibody response. Journal of Virology, 88 (17), 9947-9962. doi: 10.1128/JVI.01304-14

Suen, Willy W., Prow, Natalie A., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2014). Mechanism of West Nile virus neuroinvasion: a critical appraisal. Viruses, 6 (7), 2796-2825. doi: 10.3390/v6072796

Bingham, John, Payne, Jean, Harper, Jennifer, Frazer, Leah, Eastwood, Sarah, Wilson, Susanne, Lowther, Sue, Lunt, Ross, Warner, Simone, Carr, Mary, Hall, Roy A. and Durr, Peter A. (2014). Evaluation of a mouse model for the West Nile virus group for the purpose of determining viral pathotypes. Journal of General Virology, 95 (6), 1221-1232. doi: 10.1099/vir.0.063537-0

Warrilow, David, Watterson, Daniel, Hall, Roy A., Davis, Steven S., Weir, Richard, Kurucz, Nina, Whelan, Peter, Allcock, Richard, Hall-Mendelin, Sonja, O'Brien, Caitlin A. and Hobson-Peters, Jody (2014). A new species of mesonivirus from the Northern Territory, Australia. PLoS ONE, 9 (3) e91103, e91103.1-e91103.9. doi: 10.1371/journal.pone.0091103

Warrilow, David, Hall-Mendelin, Sonja, Hobson-Peters, Jody, Prow, Natalie A., Allcock, Richard and Hall, Roy A. (2014). Complete coding sequences of three members of the Kokobera group of flaviviruses. Genome Announcements, 2 (5) e00890-14, e00890-14.1-e00890-14.2. doi: 10.1128/genomeA.00890-14

Roby, Justin A., Hall, Roy A. and Khromykh, Alexander A. (2013). West Nile virus genome with glycosylated envelope protein and deletion of alpha helixes 1, 2 and 4 in the capsid gene is non-infectious and efficiently secretes sub-viral particles. Journal of Virology, 87 (23), 13063-13069. doi: 10.1128/JVI.01552-13

Prow, Natalie A., Tan, Cindy S. E., Wang, Wenqi, Hobson-Peters, Jody, Kidd. Lisa, Barton, Anita, Wright, John, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2013). Natural exposure of horses to mosquito-borne flaviviruses in South-East Queensland, Australia. International Journal of Environmental Research and Public Health, 10 (9), 4432-4443. doi: 10.3390/ijerph10094432

Petrovsky, Nikolai, Larena, Maximilian, Siddharthan, Venkatraman, Prow, Natalie A., Hall, Roy A., Lobigs, Mario and Morrey, John (2013). An inactivated cell culture Japanese encephalitis vaccine (JEADVAX) formulated with delta inulin adjuvant provides robust heterologous protection against West Nile encephalitis via cross-protective memory B cells and neutralizing antibody. Journal of Virology, 87 (18), 10324-10333. doi: 10.1128/JVI.00480-13

Tan, Cindy S. E., Hobson-Peters, Jody M., Stoermer, Martin J., Fairlie, David P., Khromykh, Alexander A. and Hall, Roy A. (2013). An interaction between the methyltransferase and RNA dependent RNA polymerase domains of the West Nile virus NS5 protein. Journal of General Virology, 94 (Pt. 9), 1961-1971. doi: 10.1099/vir.0.054395-0

May, Fiona J., Clark, David C., Pham, Kim, Diviney, Sinéad M., Williams, David T., Field, Emma J., Kuno, Goro, Chang, Gwong-Jen, Cheah, Wai Yuen, Setoh, Yin X., Prow, Natalie A., Hobson-Peters, Jody and Hall, Roy A. (2013). Genetic divergence among members of the Kokobera group of flaviviruses supports their separation into distinct species. Journal of General Virology, 94 (Pt. 7), 1462-1467. doi: 10.1099/vir.0.049940-0

Larena, Maximilian, Prow, Natalie A., Hall, Roy A., Petrovsky, Nikolai and Lobigs, Mario (2013). JE-ADVAX vaccine protection against Japanese encephalitis virus mediated by memory B cells in the absence of CD8+ T cells and pre-exposure neutralizing antibody. Journal of Virology, 87 (8), 4395-4402. doi: 10.1128/JVI.03144-12

Edmonds, Judith, van Grinsven, Erinke, Prow, Natalie, Bosco-Lauth, Angela, Brault, Aaron C., Bowen, Richard A., Hall, Roy and Khromykh, Alexander A. (2013). A novel bacteria-free method for generation of flavivirus infectious DNA by circular polymerase extension reaction allows accurate recapitulation of viral heterogeneity. Journal of Virology, 87 (4), 2367-2372. doi: 10.1128/JVI.03162-12

Hobson-Peters, Jody, Yam, Alice Wei Yee, Lu, Jennifer Wei Fei, Setoh, Yin Xiang, May, Fiona J., Kurucz, Nina, Walsh, Susan, Prow, Natalie A., Davis, Steven S., Weir, Richard, Melville, Lorna, Hunt, Neville, Webb, Richard I., Blitvich, Bradley J., Whelan, Peter and Hall, Roy A. (2013). A new insect-specific flavivirus from Northern Australia suppresses replication of West Nile Virus and Murray Valley Encephalitis Virus in co-infected mosquito cells. PLoS One, 8 (2) e56534, e56534. doi: 10.1371/journal.pone.0056534

Wang, Jack T. H., Schembri, Mark A. and Hall, Roy A. (2013). How much is too much assessment? Insight into assessment-driven student learning gains in large-scale undergraduate microbiology courses. Journal of Microbiology and Biology Education, 14 (1), 12-24. doi: 10.1128/jmbe.v14i1.449

Goh, Lucas Y. H., Hobson-Peters Jody, Prow, Natalie A., Gardner, Joy, Bielefeldt-Ohmann, Helle, Pyke, Alyssa T., Suhrbier, Andreas and Hall, Roy A. (2013). Neutralizing monoclonal antibodies to the E2 protein of chikungunya virus protects against disease in a mouse model. Clinical Immunology, 149 (PB), 487-497. doi: 10.1016/j.clim.2013.10.004

Setoh, Y. X., Prow, N. A., Hobson-Peters, J., Lobigs, M., Young, P. R., Khromykh, A. A. and Hall, R. A. (2012). Identification of residues in West Nile virus premembrane protein that influence viral particle secretion and virulence. Journal of General Virology, 93 (Part 9), 1965-1975. doi: 10.1099/vir.0.044453-0

Frost, Melinda J., Zhang, Jing, Edmonds, Judith H., Prow, Natalie A., Gu, Xingnian, Davis, Rodney, Hornitzky, Christine, Arzey, Kathleen E., Finlaison, Deborah, Hick, Paul, Read, Andrew, Hobson-Peters, Jody, May, Fiona J., Doggett, Stephen L., Haniotis, John, Russell, Richard C., Hall, Roy A., Khromykh, Alexander A. and Kirkland, Peter D. (2012). Characterization of virulent West Nile virus Kunjin Strain, Australia, 2011. Emerging Infectious Diseases, 18 (5), 792-800. doi: 10.3201/eid1805.111720

Hall-Mendelin, Sonja, Jansen, Cassie C., Cheah, Wai Yuen, Montgomery, Brian L., Hall, Roy A., Ritchie, Scott A. and Van den Hurk, Andrew F. (2012). Culex annulirostris (Diptera: Culicidae) host feeding patterns and Japanese encephalitis virus ecology in Northern Australia. Journal of Medical Entomology, 49 (2), 371-377. doi: 10.1603/ME11148

Hall, Roy A., Blitvich, Bradley J., Johansen, Cheryl A. and Blacksell, Stuart D. (2012). Advances in arbovirus surveillance, detection and diagnosis. Journal of Biomedicine and Biotechnology, 2012 512969, 512969.1-512969.2. doi: 10.1155/2012/512969

Prow, Natalie A., May, Fiona J., Westlake, Daniel J., Hurrelbrink, Robert J., Biron, Rebecca M., Leung, Jason Y., McMinn, Peter C., Clark, David C., Mackenzie, John S., Lobigs, Mario, Khromykh, Alexander A. and Hall, Roy A. (2011). Determinants of attenuation in the envelope protein of the flavivirus Alfuy. Journal of General Virology, 92 (10), 2286-2296. doi: 10.1099/vir.0.034793-0

Hobson-Peters, Jody, Arevalo, Carolina, Cheah, Wai Yuen, Blitvich, Bradley J., Tan, Cindy Si En, Sandis, Alexis, Araya, Luis Nazario, Hernandez, Jose Luis, Toye, Phillip and Hall, Roy A. (2011). Detection of antibodies to West Nile virus in horses, Costa Rica, 2004. Vector-Borne and Zoonotic Diseases, 11 (8), 1081-1084. doi: 10.1089/vbz.2010.0198

Setoh, Y. X., Hobson-Peters, J., Prow, N. A., Young, P. R. and Hall, R. A. (2011). Expression of recombinant West Nile virus prM protein fused to an affinity tag for use as a diagnostic antigen. Journal of Virological Methods, 175 (1), 20-27. doi: 10.1016/j.jviromet.2011.04.010

Audsley, Michelle, Edmonds, Judith, Liu, Wenjun, Mokhonov, Vlad, Mokhonova, Ekaterina, Melian, Ezequeil Balmori, Prow, Natalie, Hall, Roy A. and Khromykh, Alexander A. (2011). Virulence determinants between New York 99 and Kunjin strains of West Nile virus. Virology, 414 (1), 63-73. doi: 10.1016/j.virol.2011.03.008

Hall-Mendelin, S., O'Donoghue, P., Atwell, R., Lee, R. and Hall, R.A. (2011). An ELISA to detect serum antibodies to the salivary gland toxin of Ixodes holocyclus Neumann in dogs and rodents. Journal of Parasitological Research, 2011 283416, Article number 283416. doi: 10.1155/2011/283416

Barnard, Ross Thomas, Hall, Roy A. and Gould, Ernest A. (2011). Expecting the unexpected: Nucleic acid-based diagnosis and discovery of emerging viruses. Expert Reviews of Molecular Diagnostics, 11 (4), 409-423. doi: 10.1586/erm.11.24

Hall-Mendelin, S., Craig, S. B., Hall, R. A., O'Donoghue, P., Atwell, R. B., Tulsiani, S. M. and Graham, G. C. (2011). Tick paralysis in Australia caused by Ixodes holocyclus Neumann. Annals of Tropical Medicine and Parasitology, 105 (2), 95-106. doi: 10.1179/136485911X12899838413628

Hobson-Peters, J, Shan, J., Hall, R. A. and Toye, P. (2010). Mammalian expression of functional autologous red cell agglutination reagents for use in diagnostic assays. Journal of Virological Methods, 168 (1-2), 177-190. doi: 10.1016/j.jviromet.2010.05.012

Prow, Tarl W., Chen, Xianfeng, Prow, Natalie A., Fernando, Germain J. P., Tan, Cindy S. E., Raphael, Anthony P., Chang, David, Ruutu, Merja P., Jenkins, Derek W. K., Pyke, Alyssa, Crichton, Michael L., Raphaelli, Kristin, Goh, Lucas Y. H., Frazer, Ian H., Roberts, Michael S., Gardner, Joy, Khromykh, Alexander A., Suhrbier, Andreas, Hall, Roy A. and Kendall, Mark A. F. (2010). Nanopatch-targeted skin vaccination against West Nile virus and chikungunya virus in mice. Small, 6 (16), 1776-1784. doi: 10.1002/smll.201000331

Hall-Mendelin, Sonja, Ritchie, Scott A., Johansen, Cheryl A., Zborowski, Paul, Cortis, Giles, Dandridge, Scott, Hall, Roy A. and van den Hurk, Andrew F. (2010). Exploiting mosquito sugar feeding to detect mosquito-borne pathogens. Proceedings of the National Academy of Sciences of the United States of America, 107 (25), 11255-11259. doi: 10.1073/pnas.1002040107

Macdonald, Joanne, Poidinger, Michael, Mackenzie, John S., Russell, Richard C., Doggett, Stephen, Broom, Annette K., Phillips, Debra, Potamski, Joseph, Gard, Geoff, Whelan, Peter, Weir, Richard, Young, Paul R., Gendle, Debra, Maher, Sheryl, Barnard, Ross T. and Hall, Roy A (2010). Molecular phylogeny of edge hill virus supports its position in the yellow Fever virus group and identifies a new genetic variant. Evolutionary Bioinformatics, 6, 91-96. doi: 10.4137/ebo.s4966

Lobigs, M, Pavy, M, Hall, RA, Lobigs, P, Cooper, P, Komiya, T, Toriniwa, H and Petrovsky, N (2010). An inactivated Vero cell-grown Japanese encephalitis vaccine formulated with Advax, a novel inulin-based adjuvant, induces protective neutralizing antibody against homologous and heterologous flaviviruses. Journal of General Virology, 91 (6), 1407-1417. doi: 10.1099/vir.0.019190-0

Balmori Melian, Ezequiel, Hinzman, Edward, Nagasaki, Tomoko, Firth, Andrew E., Wills, Norma M., Nouwens, Amanda S., Blitvich, Bradley J., Leung, Jason, Funk, Anneke, Atkins, John F., Hall, Roy and Khromykh, Alexander A. (2010). NS1 ' of flaviviruses in the Japanese encephalitis virus serogroup is a product of ribosomal frameshifting and plays a role in viral neuroinvasiveness. Journal of Virology, 84 (3), 1641-1647. doi: 10.1128/JVI.01979-09

Macdonald, Joanne, Poidinger, Michael, Mackenzie, John S., Russell, Richard C., Doggett, Stephen, Broom, Annette K., Phillips, Debra, Potamski, Joseph, Gard, Geoff, Whelan, Peter, Weir, Richard, Young, Paul R., Gendle, Debra, Maher, Sheryl, Barnard, Ross T. and Hall, Roy A. (2010). Molecular phylogeny of Edge Hill virus supports its position in the yellow fever virus group and identifies a new genetic variant. Evolutionary Bioinformatics, 6 (6), 91-96.

Hall, Roy A., Tan, Si En, Selisko, Barbara, Slade, Rachael, Hobson-Peters, Jody, Canard, Bruno, Hughes, Megan, Leung, Jason Y., Balmori-Melian, Ezequiel, Hall-Mendelin, Sonja, Pham, Kim B., Clark, David C., Prow, Natalie A. and Khromykh, Alexander A. (2009). Monoclonal antibodies to the West Nile virus NS5 protein map to linear and conformational epitopes in the methyltransferase and polymerase domains. Journal of General Virology, 90 (12), 2912-2922. doi: 10.1099/vir.0.013805-0

Jansen, Cassie C., Prow, Natalie A., Webb, Cameron E., Hall, Roy A., Pyke, Alyssa T., Harrower, Bruce J., Pritchard, Ian I., Zborowski, Paul, Ritchie, Scott A., Russell, Richard C. and van den Hurk, Andrew F. (2009). Arboviruses isolated from mosquitoes collected from urban and peri-urban areas of eastern Australia. Journal of the American Mosquito Control Association, 25 (3), 272-278. doi: 10.2987/09-5908.1

Prow, Natalie A., Khromykh, Alexander A. and Hall, Roy A. (2009). West Nile virus: The current climate. Medical Laboratory Observer, 41 (4), 10-15.

Pijlman, Gorben P., Funk, Anneke, Kondratieva, Natasha, Leung, Jason, Torres, Shessy, Van der Aa, Lieke, Liu, Wen Jun, Palmenberg, Ann C., Shi, Pei-Yong, Hall, Roy A. and Khromykh, Alexander A. (2008). A highly structured,nuclease-resistant, noncoding RNA produced by flaviviruses is required for pathogenicity. Cell Host and Microbe, 4 (6), 579-591. doi: 10.1016/j.chom.2008.10.007

Hobson-Peters, Jody, Toye, Philip, Sanchez, Melissa D., Bossart, Katharine N., Wang, Lin-Fa, Clark, David C., Cheah, Wai Yuen and Hall, Roy A. (2008). A glycosylated peptide in the West Nile virus envelope protein is immunogenic during equine infection. Journal of General Virology, 89 (12), 3063-3072. doi: 10.1099/vir.0.2008/003731-0

Chang, David C., Liu, Wen J., Anraku, Itaru, Clark, David C., Pollitt, Christopher C., Suhrbier, Andreas, Hall, Roy A. and Khromykh, Alexander A. (2008). Single-round infectious particles enhance immunogenicity of a DNA vaccine against West Nile virus. Nature Biotechnology, 26 (5), 571-577. doi: 10.1038/nbt1400

Maher-Sturgess, Sheryl L., Forrester, Naomi L., Wayper, Paul J., Gould, Ernest A., Hall, Roy A., Barnard, Ross T. and Gibbs, Mark J. (2008). Universal primers that amplify RNA from all three flavivirus subgroups. Virology Journal, 5 (16) 16, 1-10. doi: 10.1186/1743-422X-5-16

Hall, RA and Khromykh, AA (2007). Drug evaluation: ChimeriVax-West Nile vaccine. Current Opinion In Molecular Therapeutics, 9 (5), 498-504.

Johansen, CA, Susai, V, Hall, RA, Mackenzie, JS, Clark, DC, May, FJ, Hemmerter, S, Smith, DW and Broom, AK (2007). Genetic and phenotypic differences between isolates of Murray Valley encephalitis virus in Western Australia, 1972-2003. Virus Genes, 35 (2), 147-154. doi: 10.1007/s11262-007-0091-2

Kay, Brian H., Boyd, Ann Marie, Ryan, Peter A. and Hall, Roy A. (2007). Mosquito feeding patterns and natural infection of vertebrates with Ross River and Barmah Forest viruses in Brisbane, Australia. American Journal of Tropical Medicine And Hygiene, 76 (3), 417-423. doi: 10.4269/ajtmh.2007.76.417

Clark, D. C., Lobigs, M., Lee, E., Howard, M. J., Clark, K., Blitvich, B. J. and Hall, R. A. (2007). In situ reactions of monoclonal antibodies with a viable mutant of Murray Valley encephalitis virus reveal an absence of dimeric NS1 protein. Journal of General Virology, 88 (4), 1175-1183. doi: 10.1099/vir.0.82609-0

Hukkanen, Renee R., Liggitt, H. Denny, Kelley, Stephen T., Grant, Richard, Anderson, David M., Hall, Roy A., Tesh, Robert B., Travassos DaRosa, Amelia P. and Bielefeldt-Ohmann, Helle (2006). West Nile and St. Louis encephalitis virus antibody seroconversion, prevalence, and persistence in naturally infected pig-tailed macaques (Macaca nemestrina). Clinical And Vaccine Immunology, 13 (6), 711-714. doi: 10.1128/CVI.00031-06

Liu, Wen Jun, Wang, Xiang Ju, Clark, David C., Lobigs, Mario, Hall, Roy A. and Khromykh, Alexander A. (2006). A single amino acid substitution in the west nile virus nonstructural protein NS2A disables its ability to inhibit alpha/beta interferon induction and attenuates virus virulence in mice. Journal of Virology, 80 (5), 2396-2404. doi: 10.1128/JVI.80.5.2396-2404.2006

Hukkanen, Renee R., Liggitt, Denny H., Kelley, Stephen T., Grant, Richard, Anderson, David, Beaty, Barry J., Marlenee, Nicole L., Hall, Roy A. and Bielefeldt-Ohmann, Helle (2006). Comparison of commercially available and novel West Nile virus immunoassays for detection of seroconversion in pig-tailed macaques (Macaca nemestrina). Comparative Medicine, 56 (1), 46-54.

May, Fiona J., Lobigs, Mario, Lee, Eva, Gendle, Debra J., Mackenzie, John S., Broom, Annette K., Conlan, James V. and Hall, Roy A. (2006). Biological, antigenic and phylogenetic characterization of the flavivirus Alfuy. Journal of General Virology, 87 (2), 329-337. doi: 10.1099/vir.0.81252-0

Oliveira, N. M. M., Broom, A. K., Mackenzie, J. S., Smith, D. W., Lindsay, M. D. A., Kay, B. H. and Hall, R. A. (2006). Epitope-blocking enzyme-linked immunosorbent assay for detection of antibodies to Ross River virus in vertebrate sera. Clinical And Vaccine Immunology, 13 (7), 814-817. doi: 10.1128/CVI.00035-06

Macdonald, Joanne, Tonry, Jessica, Hall, Roy A., Williams, Brent, Palacios, Gustavo, Ashok, Mundrigi S., Jabado, Omar, Clark, David, Tesh, Robert B., Briese, Thomas and Lipkin, W. Ian (2005). NS1 protein secretion during the acute phase of West Nile virus infection. Journal of Virology, 79 (22), 13924-13933. doi: 10.1128/JVI.79.22.13924-13933.2005

Nisbet, D. J., Lee, K. J., van den Hurk, A. F., Johansen, C. A., Kuno, G., Chang, G. J. J., Mackenzie, J. S., Ritchie, S. A. and Hall, R. A. (2005). Identification of new flaviviruses in the Kokobera virus complex. Journal of General Virology, 86 (Pt 1), 121-124. doi: 10.1099/vir.0.80381-0

Lee, Eva, Hall, Roy A. and Lobigs, Mario (2004). Common E protein determinants for attenuation of glycosaminoglycan-binding variants of Japanese encephalitis and West Nile viruses. Journal of Virology, 78 (15), 8271-8280. doi: 10.1128/JVI.78.15.8271-8280.2004

Hall, Roy A. and Khromykh, Alexander A. (2004). West Nile virus vaccines. Expert Opinion On Biological Therapy, 4 (8), 1295-1305. doi: 10.1517/14712598.4.8.1295

Arnold, S. J., Osvath, S. R., Hall, R. A., King, N. J. C. and Sedger, L. M. (2004). Regulation of antigen processing and presentation molecules in West Nile virus-infected human skin fibroblasts. Virology, 324 (2), 286-296. doi: 10.1016/j.virol.2004.03.036

Saleh, S. M., Poidinger, M., MacKenzie, J. S., Broom, A. K., Lindsay, M. D. A., Russell, R. C., Cloonan, M. J., Calisher, C. H., Burgess, G. W. and Hall, R. A. (2004). Antigenic and genetic typing of Whataroa viruses in Australia. American Journal of Tropical Medicine And Hygiene, 71 (3), 262-267. doi: 10.4269/ajtmh.2004.71.262

Johansen, C. A., Nisbet, D. J., Foley, P. N., van den Hurk, A. F., Hall, R. A., Mackenzie, J. S. and Ritchie, S. A. (2004). Flavivirus isolations from mosquitoes collected from Saibai Island in the Torres Strait, Australia, during an incursion of Japanese encephalitis virus. Medical And Veterinary Entomology, 18 (3), 281-287. doi: 10.1111/j.0269-283X.2004.00510.x

Lobigs, Mario, Pavy, Megan and Hall, Roy A. (2003). Cross-protective and Infection-Enhancing Immunity in Mice Vaccinated Against Flaviviruses Belonging to the Japanese Encephalitis Virus Serocomplex. Vaccine, 21 (15), 1572-1579. doi: 10.1016/S0264-410X(02)00743-0

Mackenzie, John S., Smith, David W. and Hall, Roy A. (2003). West Nile virus: Is there a message for Australia. Medical Journal of Australia, 178 (1), 5-6. doi: 10.5694/j.1326-5377.2003.tb05029.x

Blitvich, B. J., Marlenee, N. L., Hall, R. A., Calisher, C. H., Bowen, R. A., Roehrig, J. T., Komar, N., Langevin, S. A. and Beaty, B. J. (2003). Epitope-blocking enzyme-linked immunosorbent assays for the detection of serum antibodies to West Nile virus in multiple avian species. Journal of Clinical Microbiology, 41 (3), 1041-1047. doi: 10.1128/JCM.41.3.1041-1047.2003

Saleh, S. M., Poidinger, M., Mackenzie, J. S., Broom, A. K., Lindsay, M. D. and Hall, R. A. (2003). Complete genomic sequence of the Australian south-west genotype of Sindbis virus: Comparisons with other Sindbis strains and identification of a unique deletion in the 3 '-untranslated region. Virus Genes, 26 (3), 317-327. doi: 10.1023/A:1024407516352

van den Hurk, A. F., Nisbet, D. J., Hall, R. A., Kay, B. H., MacKenzie, J. S. and Ritchie, S. A. (2003). Vector competence of Australian mosquitoes (Diptera : Culicidae) for Japanese encephalitis virus. Journal of Medical Entomology, 40 (1), 82-90. doi: 10.1603/0022-2585-40.1.82

Wallace, M. J., Smith, D. W., Broom, A. K., Mackenzie, J. S., Hall, R. A., Shellam, G. R. and McMinn, P. C. (2003). Antibody-dependent enhancement of Murray Valley encephalitis virus virulence in mice. Journal of General Virology, 84 (7), 1723-1728. doi: 10.1099/vir.0.18980-0

Blitvich, B. J., Bowen, R. A., Marlenee, N. L., Hall, R. A., Bunning, M. L. and Beaty, B. J. (2003). Epitope-blocking enzyme-linked immunosorbent assays for detection of West Nile virus antibodies in domestic mammals. Journal of Clinical Microbiology, 41 (6), 2676-2679. doi: 10.1128/JCM.41.6.2676-2679.2003

Hall, R. A., Nisbet, D. J., Pham, K.B., Pyke, A. T., Smith, G. A. and Khromykh, A. (2003). DNA vaccine coding for the full-length infectious Kunjin virus RNA protects mice against the New York strain of West Nile virus. Proceedings of The National Academy of Sciences of The United States of America, 100 (18), 10460-10464. doi: 10.1073/pnas.1834270100

Studdert, M. J., Azoulas, J. K., Vasey, J. R., Hall, R. A., Ficorilli, N. and Huang, J. A. (2003). Polymerase chain reaction tests for the identification of Ross River, Kunjin and Murray Valley encephalitis virus infections in horses. Australian Veterinary Journal, 81 (1-2), 76-80. doi: 10.1111/j.1751-0813.2003.tb11438.x

Knox, T. B., Kay, B. H., Hall, R. A. and Ryan, P. A. (2003). Enhanced vector competence of Aedes aegypti (Diptera : Culicidae) from the torres strait compared with mainland Australia for dengue 2 and 4 viruses. Journal of Medical Entomology, 40 (6), 950-956. doi: 10.1603/0022-2585-40.6.950

Jozan, M., Evans, R., McLean, R., Hall, R., Tangredi, B., Reed, L. and Scott, J. (2003). Detection of West Nile Virus Infection in birds in the United States by blocking ELISA and immunohistochemistry. Vector-borne And Zoonotic Diseases, 3 (3), 99-110. doi: 10.1089/153036603768395799

Ritchie, S. A., Pyke, A. T., Smith, G. A., Northill, J. A., Hall, B. A., Van Den Hurk, A. F., Johansen, C. A., Montgomery, B. L. and MacKenzie, J. S. (2003). Field evaluation of a sentinel mosquito (Diptera : culicidae) trap system to detect Japanese encephalitis in remote Australia. Journal of Medical Entomology, 40 (3), 249-252. doi: 10.1603/0022-2585-40.3.249

Hall, R. A., Broom, A. K., Smith, D. W. and Mackenzie, J. S. (2002). The ecology and epidemiology of Kunjin virus. Current Topics in Microbiology and Immunology, 267, 253-269.

Scherret, J. H., Mackenzie, J. S., Hall, R. A., Deubel, V. and Gould, E. A. (2002). Phylogeny and molecular epidemiology of West Nile and Kunjin viruses. Current Topics in Microbiology and Immunology, 267, 373-390. doi: 10.1007/978-3-642-59403-8_18

Hunt, Ann R., Hall, Roy A., Kerst, Amy J., Nasci, Roger S., Savage, Harry M., Panella, Nicholas A., Gottfried, Kristy L., Burkhalter, Kristen L. and Roehrig, John T. (2002). Detection of West Nile virus antigen in mosquitoes and avian tissues by a monoclonal antibody-based capture enzyme immunoassay. Journal of Clinical Microbiology, 40 (6), 2023-2030. doi: 10.1128/JCM.40.6.2023-2030.2002

Johansen, C. A., Hall, R. A., van den Hurk, A. F., Ritchie, S. A. and Mackenzie, J. S. (2002). Detection and stability of Japanese encephalitis virus RNA and virus viability in dead infected mosquitoes under different storage conditions. American Journal of Tropical Medicine And Hygiene, 67 (6), 656-661. doi: 10.4269/ajtmh.2002.67.656

Hall, Roy A., Scherret, Jacqueline H. and Mackenzie, John S. (2001). Kunjin Virus: An Australian Variant of West Nile?. Annals of the New York Academy of Sciences, 951 (West Nile Virus: Detection, Surveillance, And Control), 153-160. doi: 10.1111/j.1749-6632.2001.tb02693.x

Scherret, J., Mackenzie, J. S., Khromykh, A. and Hall, R. A. (2001). Biological significance of glycosylation of the envelope protein of Kunjin virus. Annals of the New York Academy of Sciences, 951 (West Nile Virus: Detection, Surveillance, And Control), 361-363. doi: 10.1111/j.1749-6632.2001.tb02719.x

Boyd, A. M., Hall, R. A., Gemmell, R. T. and Kay, B. H. (2001). Experimental infection of Australian brushtail possums, Trichosurus vulpecula (Phalangeridae : Marsupialia), with Ross River and Barmah Forest viruses by use of a natural mosquito vector system. American Journal of Tropical Medicine And Hygiene, 65 (6), 777-782. doi: 10.4269/ajtmh.2001.65.777

Blitvich, B. J., Scanlon, D., Shiell, B. J., Mackenzie, J. S., Pham, K. and Hall, R. A. (2001). Determination of the intramolecular disulfide bond arrangement and biochemical identification of the glycosylation sites of the nonstructural protein NS1 of Murray Valley encephalitis virus. Journal of General Virology, 82 (Pt 9), 2251-2256. doi: 10.1099/0022-1317-82-9-2251

Pyke, A., Williams, D., Nisbet, D. J., Van Den Hurk, A. F., Johansen, C., Macdonald, J., Hall, R. A., Simmons, R.J., Mason, R.J.V., Lee, J. M., Ritchie, S. A., Smith, G. A. and Mackenzie, J. S. (2001). The appearance of a second genotype of Japanese encephalitis virus in the Australasian region. American Journal of Tropical Medicine and Hygiene, 65 (6), 747-753.

Scherret, Jacqueline H., Poidinger, Michael, Mackenzie, John S., Broom, Annette K., Deubel, Vincent, Lipkin, W. Ian, Briese, Thomas, Gould, Ernest A. and Hall, Roy A. (2001). The Relationships between West Nile and Kunjin Viruses. Emerging Infectious Diseases, 7 (4), 697-705. doi: 10.3201/eid0704.017418

Hall, R. A. (2000). The emergence of West Nile Virus - the Australian connection. Viral Immunology, 13 (4), 447-461. doi: 10.1089/vim.2000.13.447

Poidinger, Michael, Hall, Roy A., Lindsay, Michael D., Broom, Annette K. and Mackenzie, John S. (2000). The molecular epidemiology of Kokobera virus. Virus Research, 68 (1), 7-13. doi: 10.1016/S0168-1702(00)00143-X

Hall, Roy (2000). Protection by Japanese encephalitis virus vaccine (02). ProMED, 2000 (089), 20000422.0593.

Hall, R. A. (2000). West Nile Virus - diagnostic reagents offer. Promed, 2000 (053)

Broom, A. K., Wallace, M. J., Mackenzie, J. S., Smith, D. W. and Hall, R. A. (2000). Immunisation with gamma globulin to Murray Valley encephalitis virus and with an inactivated Japanese encephalitis virus vaccine as prophylaxis against Australian encephalitis: Evaluation in a mouse model. Journal of Medical Virology, 61 (2), 259-265. doi: 10.1002/(SICI)1096-9071(200006)61:2<259::AID-JMV13>3.0.CO;2-M

Lanciotti, R. S., Roehrig, J. T., Deubel, V., Smith, J. L., Parker, M., Steele, K., Crise, B., Volpe, K. E., Crabtree, M. B., Scherret, J., Hall, R. A., Mackenzie, J. S., Cropp, C. B., Panigraphy, B., Ostlund, E., Schmitt, B., Malkinson, M., Banet, C., Weissman, J., Komar, N., Savage, H. M., Stone, W. and McNamara, T. (1999). Origin of the West Nile virus responsible for an outbreak of encephalitis in the northeastern United States. Science, 286 (5448), 2333-2337. doi: 10.1126/science.286.5448.2333

Jia, Xi-Yu, Briese, Thomas, Jordan, Ingo, Rambaut, Andrew, Chi, Han Chang, Mackenzie, John S., Hall, Roy A., Scherret, Jacqui and Lipkin, W. Ian (1999). Genetic analysis of West Nile New York 1999 encephalitis virus. Lancet, 354 (9194), 1971-1972. doi: 10.1016/S0140-6736(99)05384-2

Khromykh, Alexander A., Sedlak, Petra L., Guyatt, Kimberley J., Hall, Roy A. and Westaway, Edwin G. (1999). Efficient trans-complementation of the flavivirus kunjin NS5 protein but not of the NS1 protein requires its coexpression with other components of the viral replicase. Journal of Virology, 73 (12), 10272-10280. doi: 10.1128/jvi.73.12.10272-10280.1999

Hall, R. A., Khromykh, A. A., Mackenzie, J. M., Scherret, J., Khromykh, T. and Mackenzie, J. S. (1999). Loss of dimerisation of the nonstructural protein NS1 of Kunjin virus delays viral replication and reduces virulence in mice, but still allows secretion of NS1. Virology, 264 (1), 66-75. doi: 10.1006/viro.1999.9956

Blitvich, Bradley J., Scanlon, Denis, Shiell, Brian J., Mackenzie, John S. and Hall, Roy A. (1999). Identification and analysis of truncated and elongated species of the flavivirus NS1 protein. Virus Research, 60 (1), 67-79. doi: 10.1016/S0168-1702(99)00003-9

Hall, R. A., Scherret, J., Sedlak, P. L., Poidinger, M. and Mackenzie, J. S. (1999). Isolation of homologous arborvirus cultures from heterologous mixtures using limit dilution and virus-specific enzyme imunoassays. Journal of Virological Methods, 83 (1-2), 189-192. doi: 10.1016/S0166-0934(99)00107-X

Colombage, G., Hall, R., Pavy, M. and Lobigs, M. (1998). Dna-based and alphavirus-vectored immunisation with PrM and E proteins elicits long-lived and protective immunity against the flavivirus, Murray Valley encephalitis virus. Virology, 250 (1), 151-163. doi: 10.1006/viro.1998.9357

Broom, Annette K., Hall, Roy A., Johansen, Cheryl A., Oliveira, Nidia, Howard, Megan A., Lindsay, Michael D., Kay, Brian H. and Mackenzie, John S. (1998). Identification of Australian arboviruses in inoculated cell cultures using monoclonal antibodies in ELISA. Pathology, 30 (3), 284-286. doi: 10.1080/00313029800169456

Mackenzie J.S., Broom A.K., Hall R.A., Johansen C.A., Lindsay M.D., Phillips D.A., Ritchie S.A., Russell R.C. and Smith D.W. (1998). Arboviruses in the Australian region, 1990 to 1998.. Communicable diseases intelligence, 22 (6), 93-100.

Poidinger, Michael, Roy, Sandrine, Hall, Roy A., Turley, Paul J., Scherret, Jacqueline H., Lindsay, Michael D., Broom, Annette K. and Mackenzie, John S. (1997). Genetic stability among temporally and geographically diverse isolates of Barmah Forest virus. American Journal of Tropical Medicine and Hygiene, 57 (2), 230-234. doi: 10.4269/ajtmh.1997.57.230

Kay, B. H., Hearnden, M. N., Oliveira, N. M.M., Sellner, L. N. and Hall, R. A. (1996). Alphavirus infection in mosquitoes at the Ross River reservoir, North Queensland, 1990-1993. Journal of the American Mosquito Control Association, 12 (3 Part 1), 421-428.

Poidinger M., Hall R.A. and Mackenzie J.S. (1996). Molecular characterization of the Japanese encephalitis serocomplex of the flavivirus genus. Virology, 218 (2), 417-421. doi: 10.1006/viro.1996.0213

Hall, R. A., Brand, T. N.H., Lobigs, M., Sangster, M. Y., Howard, M. J. and Mackenzie, J. S. (1996). Protective immune responses to the E and NS1 proteins of Murray Valley encephalitis virus in hybrids of flavivirus-resistant mice. Journal of General Virology, 77 (6), 1287-1294. doi: 10.1099/0022-1317-77-6-1287

Mackenzie, John S., Poidinger, Michael, Lindsay, Michael D., Hall, Roy A. and Sammels, Leanne M. (1995). Molecular epidemiology and evolution of mosquito-borne flaviviruses and alphaviruses enzootic in Australia. Virus Genes, 11 (2), 225-237. doi: 10.1007/BF01728662

Conference Papers

Wang, Jack T.H., Daly, Joshua N., Willner, Dana L., Patil, Jayee, Hall, Roy, Tyson, Gene W., Hugenholtz, Philip and Schembri, Mark A. (2014). Embedding Undergraduate Research throughout Microbiology Majors. ASM Conference for Undergraduate Educators, Danvers, MA United States, 15-18 May 2014.

Uddin, Jasim M., Suen, Willy, Prow, Natalie A, Hall, Roy A. and Bielefeldt-Ohmann, Helle (2014). West Nile virus (WNV) infection alters the cytokines and TLRs transcriptome profiles in rabbit PBL. 2nd Annual Meeting of the International Cytokine and Interferon Society (ICIS), Melbourne, VIC Australia, 26 - 29 October 2014. London, United Kingdom: Academic Press. doi: 10.1016/j.cyto.2014.07.194

Wang, Jack, Hall, Roy and Schembri, Mark (2012). Constructively aligning assessment and feedback - a way forward for integrating SOTL theory and practice in large-scale undergraduate classrooms. 9th Annual International Society for the Scholarship of Teaching and Learning Conference (ISSOTL12), Hamilton, ON, Canada, 24-27 October 2012.

Eagles, Debbie, Durr, Peter, Walker, Peter, Zalucki, Myron, Hall, Roy and Deveson, Ted (2011). Modelling the airborne spread of vectors and insect pests into northern Australia within a risk analysis framework. 1st International One Health Congress, Melbourne, Australia, 14–16 February 2011. New York, United States: Springer New York.

Khromykh, A., Funk, A., Torres, S., Edmonds, J., Pijlman, G., Hall, R., Lobigs, M., Kumagai, Y., Takeuchi, O. and Akira, S. (2009). The role of subgenomic non-coding RNA in flavivirus-host interactions and viral pathogenicity. 28th Annual Meeting of American Society for Virology, Vancouver, Canada, 11-15 July 2009.

Funk, A., Torres, S., Truong, K., Edmonds, J., Pijlman, G., Hall, R., Lobigs, M., Kumagai, Y., Takeuchi, O., Akira, S. and Khromykh, A. (2009). The role of flavivirus subgenomic non-coding RNA in overcoming host innate immune response. TLROZ 2009: Patterns Recognition Receptors in Health and Disease, Gold Coast , Australia, 28-30 October 2009.

Funk, A., Torres, S., Edmonds, J., Pijlman, G., Hall, R., Lobigs, M., Kumagai, Y., Takeuchi, O., Akira, S. and Khromykh, A. (2009). Flavivirus subgenomic non-coding RNA is required to overcome the host innate immune response. 5th Australian Virology Group Meeting, Lorne, Australia, 13-17 December 2009. Australia: Australian Virology Group.

Pijlman, G.P., Funk, A., Kondratieva, N., Leung, J., Van der Aa, L., Liu, W., Palmenberg, A.C., Hall, R.A. and Khromykh, A.A. (2008). Flaviviruses employ cellular mRNA decay machinery to generate subgenomic non-coding RNA required for pathogenicity. International Congress of Virology, Istanbul, Turkey, 10-15 Aug, 2008.

Funk, A., Pijlman, G.P., Kondratieva, N., Leung, J., Van der Aa, L., Liu, W., Palmenberg, A.C., Shi, P.-Y., Hall, R.A. and Khromykh, A. (2008). Flaviviruses employ cellular mRNA decay machinery to generate subgenomic non-coding RNA required for pathogenicity. Arbovirus Research in Australia Meeting, Coffs Harbour, Australia, 15-19 Sept, 2008.

Pijlman, G.P., Funk, A., Kondratieva, N., Leung, J., Van der Aa, L., Liu, W., Palmenberg, , A.C., Hall, R.A. and Khromykh, A. (2008). Flavivirus subgenomic RNA generated by the mRNA decay machinery supports efficient virus replication. American Society for Virology Annual Meeting, Ithaca, USA, 12-16 July, 2008.

Pijlman, G.P., Funk, A., Kondratieva, N., Leung, J., Van der Aa, L., Liu, W., Palmenberg, A.C., Hall, R.A. and Khromykh, A.A. (2008). The role of small non-coding RNAs in flavivirus replication and pathogenicity. Society for General Microbiology Meeting, Edinburgh, Scotland, 31 Mar - 3 Apr, 2008.

Khromykh, A, Liu, W, Wang,, Clark, D. C. J. and Hall, R A (2006). Modulation of interferon response by West Nile. Keystone Symposia, Keystone, Colorado, 6-11 Jan, 2006.

Mackenzie, J. S., Van Den Hurk, A. F., Johansen, C., Ritchie, S. A. and Hall, R. A. (2002). Emergence of Japanese encephalitis virus in Australia: Epidemiological features. The World of Microbes, XIIth International Congress of Virology, Paris, 25 July - 1 August, 2002.

Macdonald, J., Broom, A. K., Doggett, S., Mackenzie, J. S., Phillips, D. A., Poidinger, M., Russell, R.C., Young, P. R. and Hall, R. A. (2001). The phylogeny of Edge Hill virus. 4th Mosquito Control Association of Australia Symposium and 8th Arbovirus Research in Australia Conference, South Stradbroke Island, 3-7 July, 2000. Brisbane: QUT.

May, F. J., Nisbet, D. J., Mackenzie, J. S. and Hall, R. A. (2001). Alfuy virus: A non-pathogenic cousin of MVE?. 4th Mosquito Control Association of Australia Symposium, South Stradbroke Is, 3-7 July, 2000. Brisbane: QUT.

Nisbet, D. J., Hall, R. A., Johansen, C., Macdonald, J., Paru, R., Ritchie, S. A., Saleh, S., Van Den Hurk, A., Zborowski, P. and Mackenzie, J. S. (2001). Isolation of Sepik virus from Papua New Guinea. 4th Mosquito Control Association of Australia Symposium and 8th Arbovirus Research in Australia Conference, South Stradbroke Island, 3-7 July, 2000. Brisbane: QUT.

Macdonald, J., Terry, T. D., Harris, J. M., Mackenzie, J. S. and Hall, R. A. (2001). Phage display and the study of flaviviral protein interactions. 6th Int Symposium on Positive Strand RNA Viruses, Paris, May, 2001.

May, F. J., Nisbet, D. J., Mackenzie, J. S. and Hall, R. A. (2001). Alfuy virus: An avirulent subtype of MVE virus?. 6th Int Symposium on Positive Strand RNA Viruses, Paris, May, 2001.

Nisbet, D. J., Lee, K.L., Van Den Hurk, A. F., Johansen, C., Ritchie, S. A., Mackenzie, J. S. and Hall, R. A. (2001). Identification of new flaviviruses of the Kokobera virus group. 1st Australian Virology Group Meeting, Fraser Island, December, 2001.

Clark, D. C., Khromykh, A. A., Mackenzie, J. S. and Hall, R. A. (2001). Identification of a region of the flavivirus nonstructural protein 1 (NS1) involved in dimerization. 1st Australian Virology Group Meeting, Fraser Island, December, 2001.

Mackenzie, J. S., Chua, K. B., Daniels, P., Eaton, B. T., Field, H., Hall, R. A., Halpin, K., Johansen, C., Kirkland, P. D., Lam, S.K., Mcminn, P. C., Nisbet, D. J., Paru, R., Pyke, A. T. and Ritchie, S. A. (2001). Emerging viral diseases of South-East Asia and the Western Pacific: A brief review. International Conference on Emerging Infectious Diseases 2000, Atlanta, USA, July, 2000. Atlanta, Ga United States: National Center for Infectious Diseases. doi: 10.3201/eid0707.017703

Cartwright, L., Hall, R. A., Khromykh, A., Poidinger, M. and Mackenzie, J. S. (2001). The role of conserved RNA structures in the untranslated regions of the flavivirus genome in viral replication. 8th Arbovirus Research Symposium, Couran Cove, Qld, 3-7 July, 2000. Brisbane: QUT.

Scherret, J., Poidinger, M., Mackenzie, J. S. and Hall, R. A. (2001). Phylogenetic relationships between Kunjin and West Nile viruses. 4th Mosquito Control Association of Australia Symposium and 8th Arbovirus Research in Australia Conference, South Stradbroke Island, 3-7 July, 2000. Brisbane: QUT.

Hall, Roy A., Scherret, Jacqueline H. and Mackenzie, John S. (2001). Kunjin virus: An Australian variant of West Nile?. New York Academy of Sciences.

Mackenzie, J. S., Pyke, A., Johansen, C., Ritchie, S. A., Nisbet, D. J., Smith, G. and Hall, R. A. (2000). The emergence of Japanese encephalitis virus in the Australian zoogeographic region. Int Conference on Bacterial & Viral Virulence Factors, Smolenice, Slovakia, 24-28 Sept, 2000.

Mackenzie, J. S., Johansen, C., Ritchie, S. A., Hanna, J. N., Phillips, D. A., Pyke, A., Smith, G. A., Hall, R. A., Nisbet, D. J., Van Den Hurk, A. F., Paru, R., Zborowski, P., Flew, S., Oakley, J. and Bockarie, M. J. (2000). Encephalogenic flaviviruses in the Australian region and the emergence of Japanese encephalitis virus. XVth International Congress for Tropical Medicine and Malariology, Cartagena de Indias, Columbia, 20-25 August, 2000.

Saleh, S., Poidinger, M., Hall, R. A., Doggett, S., Russell, R. J. and Mackenzie, J. S. (1999). New Sindbis-like viruses in Australia. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Hall, R. A., Khromykh, A. A., Poidinger, M., Scherret, J., Mackenzie, J. M., MacKenzie, J. S. and Khromykh, T. (1999). Loss of dimerisation of the NS1 protein of Kunjin virus slows replication in cell culture and reduces virulence in mice. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Wallace, M. J., Smith, D., Broom, A. K., Shellam, G. R., Mcminn, P. C., Mackenzie, J. S. and Hall, R. A. (1999). Antibody mediated enhanced of Murray Valley encephalitis virus replication in mice. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Mackenzie, J. S., Johansen, C., Hanna, J. N., Ritchie, S., Phillips, D. A., Hall, R. A., Van Den Hurk, A. F., Paru, A. and Melrose, W. (1999). The ecology of Japanese encephalitis in the Australian region. Joint Annual Scientific Meeting, The Australasian Society for Infectious Diseases and The Australase, Cairns, Qld, 17-21 April 1999. Aust.: The Aust. College of Tropical Medicine.

Scherret, J., Khromykh, A. A., Calvert, A. E., Mackenzie, J. S. and Hall, R. A. (1999). The effect of glycoslation of the envelope protein in Kujin replication and pathogenesis. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Cartwright, L., Hall, R. A., Khromykh, A. A., Mackenzie, J. S. and Poidinger, M. (1999). Investigation of the structure and function of the flavivirus non-coding regions. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Pham, B. K., Hall, R. A., Halpin, K., Eaton, B. T., Wang, L. and Mackenzie, J. S. (1999). Use of monoclonal antibodies in an epitope blocking assay to detect Hendra virus-specific antibodies in sera of infected animals. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Johansen, C., Ritchie, S., Van Den Hurk, A. F., Paru, A., Zborowski, P., Drew, A., Khromykh, T., Mackenzie, J. S. and Hall, R. A. (1999). Isolation of Japanese encephalitis virus from mosquitoes collected in the western province of Papua New Guinea. 11th International Congress of Virology, Sydney, 9-13 August 1999. Aust.: Int. Union of Microbiological Societies.

Areas of research

Biochemistry and molecular biology discipline

Biotechnology discipline

Infection and immunity theme

Microbiology discipline